RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 CXXC5Q7LFL8 322 aaKnown RBP5.34□□□□□ -1.55
CLIP4-212ENST00000493551 FAM83AQ86UY5 434 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 SCYL3Q8IZE3 742 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 USP38Q8NB14 1042 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 FAM151AQ8WW52 585 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 HOOK2Q96ED9 719 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 SENP6Q9GZR1 1112 aaPredicted RBP5.34□□□□□ -1.55
CLIP4-212ENST00000493551 OR10A2Q9H208 303 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 RIOX1Q9H6W3 641 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 ATP11BQ9Y2G3 1177 aa5.34□□□□□ -1.55
CLIP4-212ENST00000493551 LRRFIP2Q9Y608 721 aaKnown RBP5.34□□□□□ -1.55
CLIP4-212ENST00000493551 RANBP2P49792 3224 aaKnown RBP5.34□□□□□ -1.56
CLIP4-212ENST00000493551 DDTLA6NHG4 134 aaPredicted RBP5.33□□□□□ -1.56
CLIP4-212ENST00000493551 CXCL11O14625 94 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 NKRFO15226 690 aaKnown RBP eCLIP5.33□□□□□ -1.56
CLIP4-212ENST00000493551 MSCO60682 206 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 ZKSCAN1P17029 563 aaPredicted RBP5.33□□□□□ -1.56
CLIP4-212ENST00000493551 CNGA1P29973 690 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 SLC25A3Q00325 362 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 CALD1Q05682 793 aaKnown RBP5.33□□□□□ -1.56
CLIP4-212ENST00000493551 SPP2Q13103 211 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 PCOLCEQ15113 449 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 SHHQ15465 462 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 SHROOM1Q2M3G4 852 aaPredicted RBP5.33□□□□□ -1.56
CLIP4-212ENST00000493551 BEND3Q5T5X7 828 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 BHLHA9Q7RTU4 235 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 GPR150Q8NGU9 434 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 TMEM176AQ96HP8 235 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 PAGR1Q9BTK6 254 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 SIL1Q9H173 461 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 BICC1Q9H694 974 aaKnown RBP5.33□□□□□ -1.56
CLIP4-212ENST00000493551 NRDE2Q9H7Z3 1164 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 ZNF112Q9UJU3 913 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 AGTPBP1Q9UPW5 1226 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 AFG3L2Q9Y4W6 797 aa5.33□□□□□ -1.56
CLIP4-212ENST00000493551 RPAP1Q9BWH6 1393 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 MAST3O60307 1309 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 SLC26A4O43511 780 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 SUSD5O60279 629 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 ERBB2P04626 1255 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 NBPF7P0C2Y1 421 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 MEOX1P50221 254 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 EXOSC9Q06265 439 aaKnown RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 EIF4HQ15056 248 aaKnown RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 RSPO2Q6UXX9 243 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 ZNF662Q6ZS27 426 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 CCAR1Q8IX12 1150 aaKnown RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 ANKRD35Q8N283 1001 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 SHCBP1Q8NEM2 672 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 NTN5Q8WTR8 489 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 TBC1D22AQ8WUA7 517 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 KCTD13Q8WZ19 329 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 KAZALD1Q96I82 304 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 PHF20Q9BVI0 1012 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 TTYH1Q9H313 450 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 DDX4Q9NQI0 724 aaKnown RBP5.32□□□□□ -1.56
CLIP4-212ENST00000493551 ARHGAP28Q9P2N2 729 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 ZNHIT2Q9UHR6 403 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 OGDHLQ9ULD0 1010 aa5.32□□□□□ -1.56
CLIP4-212ENST00000493551 MROH5Q6ZUA9 1318 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 FANCIQ9NVI1 1328 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 A0A0A6YYK5 440 aaPredicted RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 IFIT1P09914 478 aaKnown RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 SLC5A1P13866 664 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 ITGB6P18564 788 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 ADORA1P30542 326 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 ADCY8P40145 1251 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 BTDP43251 543 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 MRE11P49959 708 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 IRX3P78415 501 aaPredicted RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 IL13RA1P78552 427 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 HDLBPQ00341 1268 aaKnown RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 FAM110CQ1W6H9 321 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 KIZQ2M2Z5 673 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 CCDC184Q52MB2 194 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 MBNL2Q5VZF2 373 aaKnown RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 TRIM68Q6AZZ1 485 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 C6orf15Q6UXA7 325 aaPredicted RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 FILIP1Q7Z7B0 1213 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 MRGPREQ86SM8 312 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 DZIP1Q86YF9 867 aaKnown RBP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 HAS1Q92839 578 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 BADQ92934 168 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 FERMT2Q96AC1 680 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 FAM122AQ96E09 287 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 PORCNQ9H237 461 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLIP4-212ENST00000493551 TXNRD2Q9NNW7 524 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 ABCF2Q9UG63 623 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 GJD2Q9UKL4 321 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 STRIP2Q9ULQ0 834 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 PHIPQ8WWQ0 1821 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 DOCK2Q92608 1830 aa5.31□□□□□ -1.56
CLIP4-212ENST00000493551 DOCK1Q14185 1865 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 ATRNL1Q5VV63 1379 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 LAMA3Q16787 3333 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 INO80B-WBP1J3KQ70 363 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 PDE8BO95263 885 aa5.3□□□□□ -1.56
CLIP4-212ENST00000493551 CAPNS1P04632 268 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms