RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SEMA4GQ9NTN9 838 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 FBXL5Q9UKA1 691 aa19.38■□□□□ 0.69
NUP50-218ENST00000493456 TICRRQ7Z2Z1 1910 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 PHLPP2Q6ZVD8 1323 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 ZNF263O14978 683 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 SEC24AO95486 1093 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 CHRNB1P11230 501 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 EPHA5P54756 1037 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 SIM2Q14190 667 aaPredicted RBP19.37■□□□□ 0.69
NUP50-218ENST00000493456 LRRC32Q14392 662 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 CSRP2Q16527 193 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 HAUS3Q68CZ6 603 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 ZNF280DQ6N043 979 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 MFSD6LQ8IWD5 586 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 SPEM1Q8N4L4 309 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 GPR88Q9GZN0 384 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 ASAH2Q9NR71 780 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 NUB1Q9Y5A7 615 aa19.37■□□□□ 0.69
NUP50-218ENST00000493456 MAP1BP46821 2468 aaKnown RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 USP24Q9UPU5 2620 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 K7ERI5 159 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 PAPSS2O95340 614 aaPredicted RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 KCNE1P15382 129 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 RPL9P32969 192 aaKnown RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 MCM7P33993 719 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 SATB1Q01826 763 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 ORC2Q13416 577 aaPredicted RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 ZNF568Q3ZCX4 644 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 CTXN3Q4LDR2 81 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 PRR23CQ6ZRP0 262 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 CEP120Q8N960 986 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 ZSCAN18Q8TBC5 510 aaPredicted RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 DDX1Q92499 740 aaKnown RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 ZSWIM3Q96MP5 696 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 CDT1Q9H211 546 aa19.36■□□□□ 0.69
NUP50-218ENST00000493456 AFF4Q9UHB7 1163 aaKnown RBP19.36■□□□□ 0.69
NUP50-218ENST00000493456 TRIP11Q15643 1979 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 CHD6Q8TD26 2715 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 ARNTLO00327 626 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 NRG2O14511 850 aaPredicted RBP19.35■□□□□ 0.69
NUP50-218ENST00000493456 MOSPD3O75425 235 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 CCNE1P24864 410 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 TWF1Q12792 350 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 PTGDRQ13258 359 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 LONP2Q86WA8 852 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 APPL2Q8NEU8 664 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 CSGALNACT1Q8TDX6 532 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 GTF3C6Q969F1 213 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 SUSD3Q96L08 255 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 ACO2Q99798 780 aaKnown RBP19.35■□□□□ 0.69
NUP50-218ENST00000493456 C8orf33Q9H7E9 229 aaPredicted RBP19.35■□□□□ 0.69
NUP50-218ENST00000493456 PTPRHQ9HD43 1115 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 CNTN3Q9P232 1028 aa19.35■□□□□ 0.69
NUP50-218ENST00000493456 LAMA1P25391 3075 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 HEPACAM2A8MVW5 462 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 OR52Z1P0C646 297 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 MYL4P12829 197 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 VIPR2P41587 438 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 OSTNP61366 133 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 GAS6Q14393 721 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 HS6ST3Q8IZP7 471 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 NSUN7Q8NE18 718 aaKnown RBP19.34■□□□□ 0.69
NUP50-218ENST00000493456 ZMAT2Q96NC0 199 aaKnown RBP19.34■□□□□ 0.69
NUP50-218ENST00000493456 ACAP3Q96P50 834 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 MRPL4Q9BYD3 311 aaKnown RBP19.34■□□□□ 0.69
NUP50-218ENST00000493456 SLITRK6Q9H5Y7 841 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 TMEM134Q9H6X4 195 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 CEP72Q9P209 647 aa19.34■□□□□ 0.69
NUP50-218ENST00000493456 CHADO15335 359 aa19.33■□□□□ 0.68
NUP50-218ENST00000493456 MCF2P10911 925 aa19.33■□□□□ 0.68
NUP50-218ENST00000493456 MCM4P33991 863 aa19.33■□□□□ 0.68
NUP50-218ENST00000493456 YAF2Q8IY57 180 aa19.33■□□□□ 0.68
NUP50-218ENST00000493456 NECAB1Q8N987 351 aa19.33■□□□□ 0.68
NUP50-218ENST00000493456 BHMT2Q9H2M3 363 aa19.33■□□□□ 0.68
NUP50-218ENST00000493456 NCANO14594 1321 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 CHURC1-FNTBB4DL54 471 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 HRO43593 1189 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 CPB1P15086 417 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 FNTBP49356 437 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 ANAPC15P60006 121 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 FCHO2Q0JRZ9 810 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 PLD1Q13393 1074 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 SAFBQ15424 915 aaKnown RBP eCLIP19.32■□□□□ 0.68
NUP50-218ENST00000493456 TEAD2Q15562 447 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 ME3Q16798 604 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 DGKKQ5KSL6 1271 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 BEST2Q8NFU1 509 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 DDX12PQ92771 950 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 CHAMP1Q96JM3 812 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 OXCT2Q9BYC2 517 aaPredicted RBP19.32■□□□□ 0.68
NUP50-218ENST00000493456 PCDHB8Q9UN66 801 aa19.32■□□□□ 0.68
NUP50-218ENST00000493456 CCDC169A6NNP5 214 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 K7ESF4 209 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 GJA1P17302 382 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 PROZP22891 400 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 CCT6AP40227 531 aaKnown RBP19.31■□□□□ 0.68
NUP50-218ENST00000493456 NPTX2P47972 431 aa19.31■□□□□ 0.68
NUP50-218ENST00000493456 KPNA1P52294 538 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms