RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 PIRO00625 290 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 ITGB3P05106 788 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 CTSAP10619 480 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 EPB41P11171 864 aaKnown RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 DLG4P78352 724 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 BMS1Q14692 1282 aaKnown RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 DUOXA2Q1HG44 320 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 FAM171A1Q5VUB5 890 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 PDE12Q6L8Q7 609 aaKnown RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 CEP57Q86XR8 500 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 ZC3H3Q8IXZ2 948 aaKnown RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 CSGALNACT2Q8N6G5 542 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 PPM1EQ8WY54 764 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 SYAP1Q96A49 352 aaPredicted RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 NSUN3Q9H649 340 aaKnown RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
RER1-208ENST00000493207 ITGA11Q9UKX5 1188 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 STXBP5LQ9Y2K9 1186 aa18.21■□□□□ 0.51
RER1-208ENST00000493207 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.2■□□□□ 0.5
RER1-208ENST00000493207 HIDE1A8MVS5 230 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 C2CD2LO14523 706 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 SLC16A3O15427 465 aaKnown RBP18.2■□□□□ 0.5
RER1-208ENST00000493207 TRAPPC3O43617 180 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 CXCL14O95715 111 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 URODP06132 367 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 KRT19P08727 400 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 KRT13P13646 458 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 POLR2BP30876 1174 aaKnown RBP18.2■□□□□ 0.5
RER1-208ENST00000493207 GLUD2P49448 558 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 ELAVL2Q12926 359 aaKnown RBP18.2■□□□□ 0.5
RER1-208ENST00000493207 USP41Q3LFD5 358 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 TCEAL5Q5H9L2 206 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 SCARA3Q6AZY7 606 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 KIAA1841Q6NSI8 718 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 SASS6Q6UVJ0 657 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
RER1-208ENST00000493207 ADGRD2Q7Z7M1 963 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 TMC2Q8TDI7 906 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 ZNF516Q92618 1163 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 MKNK1Q9BUB5 465 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 MRPL17Q9NRX2 175 aaKnown RBP18.2■□□□□ 0.5
RER1-208ENST00000493207 DACH1Q9UI36 760 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 SIX4Q9UIU6 781 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 RWDD2AQ9UIY3 292 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 AGAP1Q9UPQ3 857 aa18.2■□□□□ 0.5
RER1-208ENST00000493207 VAMP7P51809 220 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 DSG1Q02413 1049 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 BFSP1Q12934 665 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 PTPN14Q15678 1187 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 FOXR2Q6PJQ5 311 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 RBM23Q86U06 439 aaKnown RBP18.19■□□□□ 0.5
RER1-208ENST00000493207 MAFAQ8NHW3 353 aaPredicted RBP18.19■□□□□ 0.5
RER1-208ENST00000493207 CXorf38Q8TB03 319 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 CEP63Q96MT8 703 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 CHST7Q9NS84 486 aa18.19■□□□□ 0.5
RER1-208ENST00000493207 C2orf71A6NGG8 1288 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 SPTLC1O15269 473 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 TRIM49P0CI25 452 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 TRIM49CP0CI26 452 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 TKTP29401 623 aaKnown RBP18.18■□□□□ 0.5
RER1-208ENST00000493207 TAF6P49848 677 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 LILRA4P59901 499 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 CLDN10P78369 228 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 RBP5P82980 135 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 RTP2Q5QGT7 225 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 KIAA0319Q5VV43 1072 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 DSTYKQ6XUX3 929 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
RER1-208ENST00000493207 TRAPPC11Q7Z392 1133 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 USP37Q86T82 979 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
RER1-208ENST00000493207 RIN2Q8WYP3 895 aaPredicted RBP18.18■□□□□ 0.5
RER1-208ENST00000493207 BORCS6Q96GS4 357 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 SUSD3Q96L08 255 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 ZNF560Q96MR9 790 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 MED15Q96RN5 788 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 R3HCC1Q9Y3T6 440 aaKnown RBP18.18■□□□□ 0.5
RER1-208ENST00000493207 TSC2P49815 1807 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 COL6A3P12111 3177 aa18.18■□□□□ 0.5
RER1-208ENST00000493207 MYO7AQ13402 2215 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 PER2O15055 1255 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 FGFR3P22607 806 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 GTF2F1P35269 517 aaKnown RBP eCLIP18.17■□□□□ 0.53e-9■■■□□ 16.6
RER1-208ENST00000493207 NRIP1P48552 1158 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 AARSP49588 968 aaKnown RBP eCLIP18.17■□□□□ 0.5
RER1-208ENST00000493207 AP3M2P53677 418 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 STX1AQ16623 288 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 SKOR2Q2VWA4 1001 aaPredicted RBP18.17■□□□□ 0.5
RER1-208ENST00000493207 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 PRSS55Q6UWB4 352 aaPredicted RBP18.17■□□□□ 0.5
RER1-208ENST00000493207 FILIP1Q7Z7B0 1213 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 PPP2R3CQ969Q6 453 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 SRRTQ9BXP5 876 aaKnown RBP18.17■□□□□ 0.5
RER1-208ENST00000493207 IGFLR1Q9H665 355 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 TLE6Q9H808 572 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 SSX2IPQ9Y2D8 614 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 IRAK3Q9Y616 596 aa18.17■□□□□ 0.5
RER1-208ENST00000493207 M0QZQ0 153 aa18.16■□□□□ 0.5
RER1-208ENST00000493207 IKBKBO14920 756 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms