RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 FSHRP23945 695 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 VCPP55072 806 aaKnown RBP19.59■□□□□ 0.73
PTPRU-207ENST00000492954 ARPP19P56211 112 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 KCNA1Q09470 495 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 UVSSAQ2YD98 709 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 CTXN3Q4LDR2 81 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 ADALQ6DHV7 355 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 SPRYD3Q8NCJ5 442 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 HVCN1Q96D96 273 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.59■□□□□ 0.73
PTPRU-207ENST00000492954 IGSF9Q9P2J2 1179 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 FBXL5Q9UKA1 691 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 AGO2Q9UKV8 859 aaKnown RBP19.59■□□□□ 0.73
PTPRU-207ENST00000492954 PCDHB8Q9UN66 801 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.59■□□□□ 0.73
PTPRU-207ENST00000492954 STYXL1Q9Y6J8 313 aa19.59■□□□□ 0.73
PTPRU-207ENST00000492954 PDCD11Q14690 1871 aaKnown RBP19.58■□□□□ 0.73
PTPRU-207ENST00000492954 FRMD3A2A2Y4 597 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 H7C4K7 107 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 PPEF2O14830 753 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 XPOTO43592 962 aaKnown RBP19.58■□□□□ 0.72
PTPRU-207ENST00000492954 GCNT3O95395 438 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 YEATS4O95619 227 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 NFICP08651 508 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 CASP5P51878 434 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 PKP1Q13835 747 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 IER5LQ5T953 404 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 SLFN12LQ6IEE8 588 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 APPL2Q8NEU8 664 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 KCNH6Q9H252 994 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 HCFC1R1Q9NWW0 138 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 DUSP12Q9UNI6 340 aa19.58■□□□□ 0.72
PTPRU-207ENST00000492954 NARSO43776 548 aaKnown RBP19.57■□□□□ 0.72
PTPRU-207ENST00000492954 ABLIM3O94929 683 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 F13A1P00488 732 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 POU2F2P09086 479 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 LAMP2P13473 410 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 ADSSP30520 456 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 AARSP49588 968 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTPRU-207ENST00000492954 L1TD1Q5T7N2 865 aaKnown RBP19.57■□□□□ 0.72
PTPRU-207ENST00000492954 SPATA1Q5VX52 437 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 ZNF280DQ6N043 979 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 CD302Q8IX05 232 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 ST13P5Q8NFI4 369 aaPredicted RBP19.57■□□□□ 0.72
PTPRU-207ENST00000492954 BEST2Q8NFU1 509 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 ZNF461Q8TAF7 563 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 POMGNT1Q8WZA1 660 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 ACCSQ96QU6 501 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 TSPAN18Q96SJ8 248 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 FGFBP2Q9BYJ0 223 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 OLFML3Q9NRN5 406 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 PANK4Q9NVE7 773 aa19.57■□□□□ 0.72
PTPRU-207ENST00000492954 TIMM13Q9Y5L4 95 aaPredicted RBP19.57■□□□□ 0.72
PTPRU-207ENST00000492954 DOCK8Q8NF50 2099 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 M0QZQ0 153 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 PRRG1O14668 218 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 ELF1P32519 619 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 TMEM132DQ14C87 1099 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 E2F4Q16254 413 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 SHC4Q6S5L8 630 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 CRELD2Q6UXH1 353 aaPredicted RBP19.56■□□□□ 0.72
PTPRU-207ENST00000492954 RTL10Q7L3V2 364 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 ITFG1Q8TB96 612 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 DNMT3BQ9UBC3 853 aaKnown RBP19.56■□□□□ 0.72
PTPRU-207ENST00000492954 CDH7Q9ULB5 785 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 EXOC7Q9UPT5 735 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 DOCK6Q96HP0 2047 aa19.56■□□□□ 0.72
PTPRU-207ENST00000492954 CUTAO60888 179 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 SEC24AO95486 1093 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 PDIA4P13667 645 aaKnown RBP19.55■□□□□ 0.72
PTPRU-207ENST00000492954 ATF2P15336 505 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 AVPR2P30518 371 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 YWHAHQ04917 246 aaPredicted RBP19.55■□□□□ 0.72
PTPRU-207ENST00000492954 PABPC1LQ4VXU2 614 aaKnown RBP19.55■□□□□ 0.72
PTPRU-207ENST00000492954 DSTYKQ6XUX3 929 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 SLC44A3Q8N4M1 653 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 PRSS33Q8NF86 280 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 DHX58Q96C10 678 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 TNMDQ9H2S6 317 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 ASB7Q9H672 318 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 CYP4F11Q9HBI6 524 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 DERAQ9Y315 318 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 PCDHB13Q9Y5F0 798 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 MYH15Q9Y2K3 1946 aa19.55■□□□□ 0.72
PTPRU-207ENST00000492954 ARHGEF37A1IGU5 675 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 ANHXE9PGG2 379 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 LRG1P02750 347 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 LILRA4P59901 499 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 HTR4Q13639 388 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 POSTNQ15063 836 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 C9orf57Q5W0N0 161 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 TPGS2Q68CL5 300 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 CCDC65Q8IXS2 484 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 TCEAL8Q8IYN2 117 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 ZSWIM2Q8NEG5 633 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 KCNG4Q8TDN1 519 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 FGF13Q92913 245 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 NXPE3Q969Y0 559 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 KBTBD4Q9NVX7 518 aa19.54■□□□□ 0.72
PTPRU-207ENST00000492954 FBXL21Q9UKT6 434 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms