RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 CEP68Q76N32 757 aa16.77■□□□□ 0.28
EPHB4-209ENST00000492878 C12orf50Q8NA57 414 aaPredicted RBP16.77■□□□□ 0.28
EPHB4-209ENST00000492878 C8orf33Q9H7E9 229 aaPredicted RBP16.77■□□□□ 0.28
EPHB4-209ENST00000492878 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
EPHB4-209ENST00000492878 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.28
EPHB4-209ENST00000492878 MYBPHLA2RUH7 354 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 I3L4J1 428 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 PRRG1O14668 218 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 CHADO15335 359 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 TRAPPC3O43617 180 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 EDN1P05305 212 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 CCINQ13939 588 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 MRPL58Q14197 206 aaKnown RBP16.76■□□□□ 0.27
EPHB4-209ENST00000492878 CYP4A22Q5TCH4 519 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 TPGS2Q68CL5 300 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 TXNDC11Q6PKC3 985 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 SYNPOQ8N3V7 929 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 LEMD2Q8NC56 503 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 ZSCAN18Q8TBC5 510 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-209ENST00000492878 GAB3Q8WWW8 586 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 E2F7Q96AV8 911 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 AIFM3Q96NN9 605 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 EIF2AK1Q9BQI3 630 aaKnown RBP16.76■□□□□ 0.27
EPHB4-209ENST00000492878 CCDC113Q9H0I3 377 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 CEP72Q9P209 647 aa16.76■□□□□ 0.27
EPHB4-209ENST00000492878 SETXQ7Z333 2677 aaKnown RBP16.75■□□□□ 0.27
EPHB4-209ENST00000492878 TRIP11Q15643 1979 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 LRRIQ4A6NIV6 560 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 HEPACAM2A8MVW5 462 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 AXIN1O15169 862 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 CCNT1O60563 726 aaKnown RBP16.75■□□□□ 0.27
EPHB4-209ENST00000492878 CDKL5O76039 1030 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 ELF1P32519 619 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 BRCC3P46736 316 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 SOX9P48436 509 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 CCDC6Q16204 474 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 CACNA2D4Q7Z3S7 1137 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 SLFN12Q8IYM2 578 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 HS6ST3Q8IZP7 471 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 NAP1L4Q99733 375 aaKnown RBP16.75■□□□□ 0.27
EPHB4-209ENST00000492878 CYP4F11Q9HBI6 524 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 GPRC5CQ9NQ84 441 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 MAFFQ9ULX9 164 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 PCDHGA5Q9Y5G8 931 aa16.75■□□□□ 0.27
EPHB4-209ENST00000492878 GCN1Q92616 2671 aaKnown RBP16.74■□□□□ 0.27
EPHB4-209ENST00000492878 CCDC194A0A1B0GVG4 234 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 SLC38A8A6NNN8 435 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 SPECC1L-ADORA2AF8WAN1 911 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 ACKR2O00590 384 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
EPHB4-209ENST00000492878 CTHP32929 405 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
EPHB4-209ENST00000492878 GLRA4Q5JXX5 417 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 EEF1DP3Q658K8 133 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 RALGPS2Q86X27 583 aaPredicted RBP16.74■□□□□ 0.27
EPHB4-209ENST00000492878 CSGALNACT1Q8TDX6 532 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 ZC3H10Q96K80 434 aaKnown RBP16.74■□□□□ 0.27
EPHB4-209ENST00000492878 GPR88Q9GZN0 384 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
EPHB4-209ENST00000492878 GOLGA2P5Q9HBQ8 144 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 KCNJ14Q9UNX9 436 aa16.74■□□□□ 0.27
EPHB4-209ENST00000492878 SYN3O14994 580 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 AKAP3O75969 853 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 LARGE1O95461 756 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 SOX4Q06945 474 aaPredicted RBP16.73■□□□□ 0.27
EPHB4-209ENST00000492878 ME3Q16798 604 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 DCAF4L1Q3SXM0 396 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 XKR4Q5GH76 650 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 PSAPL1Q6NUJ1 521 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 ZBTB8OSQ8IWT0 167 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 NECAB1Q8N987 351 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 SHKBP1Q8TBC3 707 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 KIF2CQ99661 725 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 ADPGKQ9BRR6 497 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 LRRC3Q9BY71 257 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 C2orf40Q9H1Z8 148 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 EML5Q05BV3 1969 aa16.73■□□□□ 0.27
EPHB4-209ENST00000492878 LAMA5O15230 3695 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 SMIM28A0A1B0GU29 152 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 TMEM8BA6NDV4 472 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 EXTL3O43909 919 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 RPP40O75818 363 aaKnown RBP16.72■□□□□ 0.27
EPHB4-209ENST00000492878 PRKCBP05771 671 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 GJA1P17302 382 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 KPNA1P52294 538 aaPredicted RBP16.72■□□□□ 0.27
EPHB4-209ENST00000492878 TEAD2Q15562 447 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 MAPK6Q16659 721 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 IQCEQ6IPM2 695 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 ALKAL1Q6UXT8 129 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 ELMOD1Q8N336 334 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 MCPH1Q8NEM0 835 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 BSNDQ8WZ55 320 aa16.72■□□□□ 0.27
EPHB4-209ENST00000492878 GTF3C6Q969F1 213 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms