RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ZNF131P52739 623 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 STARD6P59095 220 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 YWHAHQ04917 246 aaPredicted RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 SOX4Q06945 474 aaPredicted RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 MRPL58Q14197 206 aaKnown RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 ANGPT1Q15389 498 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 SLC10A6Q3KNW5 377 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 CTXN3Q4LDR2 81 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 CYP4A22Q5TCH4 519 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 IQCEQ6IPM2 695 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 ZC3H14Q6PJT7 736 aaKnown RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 CD300LGQ6UXG3 332 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 USP37Q86T82 979 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 GPBP1Q86WP2 473 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 C3orf58Q8NDZ4 430 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 GPR152Q8TDT2 470 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 RSAD2Q8WXG1 361 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 RAD54LQ92698 747 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 DDX12PQ92771 950 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 HVCN1Q96D96 273 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 ZMAT2Q96NC0 199 aaKnown RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 NELL2Q99435 816 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 CCSER1Q9C0I3 900 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 GPR88Q9GZN0 384 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 CXCL16Q9H2A7 254 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 RPF1Q9H9Y2 349 aaKnown RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 TBC1D17Q9HA65 648 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 CYP4F11Q9HBI6 524 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 SEL1LQ9UBV2 794 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 STK17AQ9UEE5 414 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 AFF4Q9UHB7 1163 aaKnown RBP9.53□□□□□ -0.88
NUP50-217ENST00000491860 CA14Q9ULX7 337 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 TBX20Q9UMR3 447 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 DERAQ9Y315 318 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 SIT1Q9Y3P8 196 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 DOCK6Q96HP0 2047 aa9.53□□□□□ -0.88
NUP50-217ENST00000491860 TTC26A0AVF1 554 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 WDR27A2RRH5 827 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 KRBA1A5PL33 1030 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 NCAM2O15394 837 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 ADAM12O43184 909 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 TBC1D4O60343 1298 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 OAZ2O95190 189 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 RHOP08100 348 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 CXCL8P10145 99 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 PDIA4P13667 645 aaKnown RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 CPB1P15086 417 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 TYMPP19971 482 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 DDIT3P35638 169 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 GTF2BQ00403 316 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 POSTNQ15063 836 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 SF3A1Q15459 793 aaKnown RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 PDZD4Q76G19 769 aaPredicted RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 NT5DC4Q86YG4 428 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 MAP4K3Q8IVH8 894 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 BEST2Q8NFU1 509 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 FEZF2Q8TBJ5 459 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 LARP4BQ92615 738 aaKnown RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 DNASE1L2Q92874 299 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 E2F7Q96AV8 911 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 ELSPBP1Q96BH3 223 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 KIF12Q96FN5 646 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 ZBTB45Q96K62 511 aaPredicted RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 ZNF512Q96ME7 567 aaPredicted RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 PLIN2Q99541 437 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 REEP2Q9BRK0 252 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 ASB7Q9H672 318 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 DNMT3BQ9UBC3 853 aaKnown RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 HSFX1Q9UBD0 423 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 FBXL5Q9UKA1 691 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 DSEQ9UL01 958 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 EXOC7Q9UPT5 735 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 MRPS17Q9Y2R5 130 aaKnown RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 MORC2Q9Y6X9 1032 aaPredicted RBP9.52□□□□□ -0.89
NUP50-217ENST00000491860 MIA3Q5JRA6 1907 aa9.52□□□□□ -0.89
NUP50-217ENST00000491860 KANSL1LA0AUZ9 987 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 MED19A0JLT2 244 aaPredicted RBP9.51□□□□□ -0.89
NUP50-217ENST00000491860 VPS37CA5D8V6 355 aaPredicted RBP9.51□□□□□ -0.89
NUP50-217ENST00000491860 I3L4J1 428 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 PI15O43692 258 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 FGF19O95750 216 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 LMNAP02545 664 aaKnown RBP9.51□□□□□ -0.89
NUP50-217ENST00000491860 ADRB2P07550 413 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 ODC1P11926 461 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 GAP43P17677 238 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 PLCG1P19174 1290 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 AARSP49588 968 aaKnown RBP eCLIP9.51□□□□□ -0.89
NUP50-217ENST00000491860 SMARCB1Q12824 385 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 CUL4AQ13619 759 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 MYBPC2Q14324 1141 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 PUM1Q14671 1186 aaKnown RBP eCLIP9.51□□□□□ -0.89
NUP50-217ENST00000491860 MLF2Q15773 248 aaPredicted RBP9.51□□□□□ -0.89
NUP50-217ENST00000491860 ARSHQ5FYA8 562 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 C1orf228Q6PIY5 440 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 PARM1Q6UWI2 310 aa9.51□□□□□ -0.89
NUP50-217ENST00000491860 DSTYKQ6XUX3 929 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms