RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 TMEM60Q9H2L4 133 aa15.86■□□□□ 0.13
SSR4-212ENST00000491833 ASAH2Q9NR71 780 aa15.86■□□□□ 0.13
SSR4-212ENST00000491833 TNFSF13BQ9Y275 285 aa15.86■□□□□ 0.13
SSR4-212ENST00000491833 NUB1Q9Y5A7 615 aa15.86■□□□□ 0.13
SSR4-212ENST00000491833 PHLPP2Q6ZVD8 1323 aa15.86■□□□□ 0.13
SSR4-212ENST00000491833 PDCD11Q14690 1871 aaKnown RBP15.86■□□□□ 0.13
SSR4-212ENST00000491833 NRG2O14511 850 aaPredicted RBP15.85■□□□□ 0.13
SSR4-212ENST00000491833 FOXD2O60548 495 aaPredicted RBP15.85■□□□□ 0.13
SSR4-212ENST00000491833 CHRNB1P11230 501 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 MYL4P12829 197 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 CCNE1P24864 410 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 RPA1P27694 616 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 CNR2P34972 360 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 TWF1Q12792 350 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 TRIM29Q14134 588 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 CSRP2Q16527 193 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 CTXN3Q4LDR2 81 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 HAUS3Q68CZ6 603 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 C1orf228Q6PIY5 440 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 SPEM1Q8N4L4 309 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 ZSCAN18Q8TBC5 510 aaPredicted RBP15.85■□□□□ 0.13
SSR4-212ENST00000491833 CSGALNACT1Q8TDX6 532 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 KIFAP3Q92845 792 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 CHAMP1Q96JM3 812 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 ZNF512Q96ME7 567 aaPredicted RBP15.85■□□□□ 0.13
SSR4-212ENST00000491833 CDT1Q9H211 546 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 SLITRK6Q9H5Y7 841 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 FBXL5Q9UKA1 691 aa15.85■□□□□ 0.13
SSR4-212ENST00000491833 CHURC1-FNTBB4DL54 471 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 CPB1P15086 417 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 MCM7P33993 719 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 VIPR2P41587 438 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 FNTBP49356 437 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 FOSBP53539 338 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 OSTNP61366 133 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 PTGDRQ13258 359 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 ANKRD1Q15327 319 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 XKR4Q5GH76 650 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 LONP2Q86WA8 852 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 MFSD6LQ8IWD5 586 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 YAF2Q8IY57 180 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 HS6ST3Q8IZP7 471 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 E2F7Q96AV8 911 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 ZSWIM3Q96MP5 696 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 TRPV4Q9HBA0 871 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 CEP72Q9P209 647 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 AFF4Q9UHB7 1163 aaKnown RBP15.84■□□□□ 0.13
SSR4-212ENST00000491833 NCANO14594 1321 aa15.84■□□□□ 0.13
SSR4-212ENST00000491833 F5P12259 2224 aa15.83■□□□□ 0.13
SSR4-212ENST00000491833 HEPACAM2A8MVW5 462 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 K7ERI5 159 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 ARNTLO00327 626 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 MOSPD3O75425 235 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 PAPSS2O95340 614 aaPredicted RBP15.83■□□□□ 0.12
SSR4-212ENST00000491833 GJA1P17302 382 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 MUTP22033 750 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 KCNA4P22459 653 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 MCM4P33991 863 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 EPHA5P54756 1037 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 MLLT6P55198 1093 aaPredicted RBP15.83■□□□□ 0.12
SSR4-212ENST00000491833 MRPL58Q14197 206 aaKnown RBP15.83■□□□□ 0.12
SSR4-212ENST00000491833 GAS6Q14393 721 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 TEAD2Q15562 447 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 ALKAL1Q6UXT8 129 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 DDX1Q92499 740 aaKnown RBP15.83■□□□□ 0.12
SSR4-212ENST00000491833 GPR88Q9GZN0 384 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 C8orf33Q9H7E9 229 aaPredicted RBP15.83■□□□□ 0.12
SSR4-212ENST00000491833 CNTN3Q9P232 1028 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 MAFFQ9ULX9 164 aa15.83■□□□□ 0.12
SSR4-212ENST00000491833 CITO14578 2027 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 OR52Z1P0C646 297 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 KCNE1P15382 129 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 RPL9P32969 192 aaKnown RBP15.82■□□□□ 0.12
SSR4-212ENST00000491833 KPNA1P52294 538 aaPredicted RBP15.82■□□□□ 0.12
SSR4-212ENST00000491833 DMWDQ09019 674 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 SRSF5Q13243 272 aaKnown RBP15.82■□□□□ 0.12
SSR4-212ENST00000491833 NSUN7Q8NE18 718 aaKnown RBP15.82■□□□□ 0.12
SSR4-212ENST00000491833 APPL2Q8NEU8 664 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 FAM200AQ8TCP9 573 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 GTF3C6Q969F1 213 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 SUSD3Q96L08 255 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 ZMAT2Q96NC0 199 aaKnown RBP15.82■□□□□ 0.12
SSR4-212ENST00000491833 ACO2Q99798 780 aaKnown RBP15.82■□□□□ 0.12
SSR4-212ENST00000491833 MRPL4Q9BYD3 311 aaKnown RBP15.82■□□□□ 0.12
SSR4-212ENST00000491833 BHMT2Q9H2M3 363 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 YIPF1Q9Y548 306 aa15.82■□□□□ 0.12
SSR4-212ENST00000491833 SLC38A8A6NNN8 435 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 CCDC169A6NNP5 214 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 K7ESF4 209 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 CHADO15335 359 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 HRO43593 1189 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 GDF9O60383 454 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 MCF2P10911 925 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 MAP1BP46821 2468 aaKnown RBP15.81■□□□□ 0.12
SSR4-212ENST00000491833 PLD1Q13393 1074 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 ORC2Q13416 577 aaPredicted RBP15.81■□□□□ 0.12
SSR4-212ENST00000491833 AASDHQ4L235 1098 aaPredicted RBP15.81■□□□□ 0.12
SSR4-212ENST00000491833 DGKKQ5KSL6 1271 aa15.81■□□□□ 0.12
SSR4-212ENST00000491833 HEATR6Q6AI08 1181 aaKnown RBP15.81■□□□□ 0.12
SSR4-212ENST00000491833 IL31Q6EBC2 164 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms