RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 SCFD1Q8WVM8 642 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 SMARCE1Q969G3 411 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 BICD1Q96G01 975 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 CDT1Q9H211 546 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 CLSTN2Q9H4D0 955 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 KCNK12Q9HB15 430 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 SNTG2Q9NY99 539 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 DPP7Q9UHL4 492 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 DUSP12Q9UNI6 340 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 PCDHA5Q9Y5H7 936 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 CLUHO75153 1309 aa16.35■□□□□ 0.21
CDC42SE1-205ENST00000491825 CLDN3O15551 220 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 GALR2O43603 387 aaPredicted RBP16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 RECQL4O94761 1208 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 KIF4AO95239 1232 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 HOXD13P35453 343 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 KCNA1Q09470 495 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 TDGQ13569 410 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 COBLL1Q53SF7 1204 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 CWF19L1Q69YN2 538 aaKnown RBP16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 RIN2Q8WYP3 895 aaPredicted RBP16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 PLEKHA4Q9H4M7 779 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 SLC39A2Q9NP94 309 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 FAM86C1Q9NVL1 165 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 ANKFY1Q9P2R3 1169 aa16.34■□□□□ 0.21
CDC42SE1-205ENST00000491825 SF3B1O75533 1304 aaKnown RBP eCLIP16.34■□□□□ 0.219e-7■■■■■ 57.4
CDC42SE1-205ENST00000491825 PLXNA3P51805 1871 aa16.33■□□□□ 0.21
CDC42SE1-205ENST00000491825 A0A0B4J269 797 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 CASTOR2A6NHX0 329 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 FAM189A1O60320 539 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 PRPF6O94906 941 aaKnown RBP16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 KIF20AO95235 890 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 SPATA31D3P0C874 917 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 RPL17P18621 184 aaKnown RBP16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 PTMSP20962 102 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 GRM5P41594 1212 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 SNRPFP62306 86 aaKnown RBP16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 KYAT1Q16773 422 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 ASTLQ6HA08 431 aaPredicted RBP16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 SLFN12LQ6IEE8 588 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 ELMSAN1Q6PJG2 1045 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 PRSS55Q6UWB4 352 aaPredicted RBP16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 SPATA31D4Q6ZUB0 917 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 PALB2Q86YC2 1186 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 SMG7Q92540 1137 aaKnown RBP16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 MYADMQ96S97 322 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 ZDHHC7Q9NXF8 308 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 EPS15L1Q9UBC2 864 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 C2orf16Q68DN1 1984 aa16.33■□□□□ 0.2
CDC42SE1-205ENST00000491825 H0Y858 1186 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 NPR3P17342 541 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 GARTP22102 1010 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 ADSSP30520 456 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 CLCN5P51795 746 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 CREMQ03060 361 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 ZNF658Q5TYW1 1059 aaPredicted RBP16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 GLYCTKQ8IVS8 523 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 SYCP3Q8IZU3 236 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 TRIML1Q8N9V2 468 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 TMEM174Q8WUU8 243 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 PIK3R5Q8WYR1 880 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 ZBTB45Q96K62 511 aaPredicted RBP16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 TCHPQ9BT92 498 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 HAPLN2Q9GZV7 340 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 KIAA1468Q9P260 1216 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 IGSF9Q9P2J2 1179 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 FBXW11Q9UKB1 542 aa16.32■□□□□ 0.2
CDC42SE1-205ENST00000491825 ANKRD63C9JTQ0 380 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 NARSO43776 548 aaKnown RBP16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 TADA2AO75478 443 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 THP07101 528 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 LNX1Q8TBB1 728 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 RSAD2Q8WXG1 361 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 CLSTN3Q9BQT9 956 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 TTPALQ9BTX7 342 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 CCDC94Q9BW85 323 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 PRKD2Q9BZL6 878 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 IRF2BPLQ9H1B7 796 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 MAN1B1Q9UKM7 699 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 GDAQ9Y2T3 454 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 CITO14578 2027 aa16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 TDRD15B5MCY1 1934 aaKnown RBP16.31■□□□□ 0.2
CDC42SE1-205ENST00000491825 TISP43B9A030 160 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 KIAA0391O15091 583 aaKnown RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 OGTO15294 1046 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 TGFB1I1O43294 461 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 ZMYND10O75800 440 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 IGFBP6P24592 240 aaPredicted RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 GBP2P32456 591 aaPredicted RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 POU5F1Q01860 360 aaKnown RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 MORC3Q14149 939 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms