RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 INSL5Q9Y5Q6 135 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 PIAS3Q9Y6X2 628 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 TSC2P49815 1807 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 OBSL1O75147 1896 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 MYO16Q9Y6X6 1858 aa14.54□□□□□ -0.08
USF1-206ENST00000491629 BAHCC1Q9P281 2608 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.53□□□□□ -0.08
USF1-206ENST00000491629 CHURC1-FNTBB4DL54 471 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 K7ESF4 209 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 ABLIM1O14639 778 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 PRRG1O14668 218 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 RETP07949 1114 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 PSMC3P17980 439 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 FNTBP49356 437 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 FOSBP53539 338 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 EPHA5P54756 1037 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 ARPP19P56211 112 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 ST3GAL2Q16842 350 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 TAS1R3Q7RTX0 852 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 DIS3L2Q8IYB7 885 aaKnown RBP14.53□□□□□ -0.08
USF1-206ENST00000491629 IRF7Q92985 503 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 C18orf25Q96B23 403 aaPredicted RBP14.53□□□□□ -0.08
USF1-206ENST00000491629 CDT1Q9H211 546 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 SEMA4GQ9NTN9 838 aa14.53□□□□□ -0.08
USF1-206ENST00000491629 RBM12Q9NTZ6 932 aaKnown RBP14.53□□□□□ -0.08
USF1-206ENST00000491629 FAM208BQ5VWN6 2430 aa14.52□□□□□ -0.08
USF1-206ENST00000491629 PODXLO00592 558 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 TRAPPC3O43617 180 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 LRP3O75074 770 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 CCNE1P24864 410 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 RPA1P27694 616 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 SOX9P48436 509 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 NRLP54845 237 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 OSTNP61366 133 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 ME3Q16798 604 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 PRR23CQ6ZRP0 262 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 PRR23BQ6ZRT6 265 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 Q6ZS52 159 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 NSUN7Q8NE18 718 aaKnown RBP14.52□□□□□ -0.09
USF1-206ENST00000491629 DEPTORQ8TB45 409 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 NETO1Q8TDF5 533 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 LRRC3BQ96PB8 259 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 ACO2Q99798 780 aaKnown RBP14.52□□□□□ -0.09
USF1-206ENST00000491629 LRRC3Q9BY71 257 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 TRPV4Q9HBA0 871 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 TNFSF13BQ9Y275 285 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 KIAA1549LQ6ZVL6 1849 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 SPEGQ15772 3267 aa14.52□□□□□ -0.09
USF1-206ENST00000491629 ZFYVE26Q68DK2 2539 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 AKAP13Q12802 2813 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 JAK2O60674 1132 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 ELF1P32519 619 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 MCM7P33993 719 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 GRM5P41594 1212 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 CXCL12P48061 93 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 CCR3P51677 355 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 ST3GAL1Q11201 340 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 TWF1Q12792 350 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 PTGDRQ13258 359 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 TEAD2Q15562 447 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 CSRP2Q16527 193 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 TXNDC11Q6PKC3 985 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 PDZD4Q76G19 769 aaPredicted RBP14.51□□□□□ -0.09
USF1-206ENST00000491629 GPIHBP1Q8IV16 184 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 MFSD6LQ8IWD5 586 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 DAW1Q8N136 415 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 SHKBP1Q8TBC3 707 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 ZSCAN18Q8TBC5 510 aaPredicted RBP14.51□□□□□ -0.09
USF1-206ENST00000491629 IER2Q9BTL4 223 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 CRISPLD1Q9H336 500 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 SCN1AP35498 2009 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 NUP205Q92621 2012 aa14.51□□□□□ -0.09
USF1-206ENST00000491629 IGF2RP11717 2491 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 ARHGEF35A5YM69 484 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 HEPACAM2A8MVW5 462 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 ZNF197O14709 1029 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 SYN3O14994 580 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 PAPSS2O95340 614 aaPredicted RBP14.5□□□□□ -0.09
USF1-206ENST00000491629 PROZP22891 400 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 EFNA5P52803 228 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 SIM2Q14190 667 aaPredicted RBP14.5□□□□□ -0.09
USF1-206ENST00000491629 STXBP5Q5T5C0 1151 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 TPGS2Q68CL5 300 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 RNF19BQ6ZMZ0 732 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 TMC8Q8IU68 726 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 SPEM1Q8N4L4 309 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 WASF1Q92558 559 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 SUSD3Q96L08 255 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 MKNK1Q9BUB5 465 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 DNAJC25Q9H1X3 360 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 BRMS1Q9HCU9 246 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 RAB23Q9ULC3 237 aa14.5□□□□□ -0.09
USF1-206ENST00000491629 TCHHQ07283 1943 aa14.49□□□□□ -0.09
USF1-206ENST00000491629 ATRXP46100 2492 aa14.49□□□□□ -0.09
USF1-206ENST00000491629 SLC38A8A6NNN8 435 aa14.49□□□□□ -0.09
USF1-206ENST00000491629 TM4SF5O14894 197 aa14.49□□□□□ -0.09
USF1-206ENST00000491629 ZNF263O14978 683 aa14.49□□□□□ -0.09
USF1-206ENST00000491629 MYL4P12829 197 aa14.49□□□□□ -0.09
USF1-206ENST00000491629 KCNE1P15382 129 aa14.49□□□□□ -0.09
USF1-206ENST00000491629 PPP2R5AQ15172 486 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms