RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 ITGB1P05556 798 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 LAG3P18627 525 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 PBX3P40426 434 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 AARSP49588 968 aaKnown RBP eCLIP19.67■□□□□ 0.743e-6■■■■■ 61.8
PRDM2-209ENST00000491134 MXI1P50539 228 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 COPB1P53618 953 aaKnown RBP19.67■□□□□ 0.74
PRDM2-209ENST00000491134 RAB30Q15771 203 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 VWA3BQ502W6 1294 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 EPC2Q52LR7 807 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 KRT39Q6A163 491 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 DCLRE1AQ6PJP8 1040 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 SLC39A11Q8N1S5 342 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 LMO3Q8TAP4 145 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 TAS1R2Q8TE23 839 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 SEMA4DQ92854 862 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 FAM193BQ96PV7 902 aaPredicted RBP19.67■□□□□ 0.74
PRDM2-209ENST00000491134 NDST4Q9H3R1 872 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 TAB2Q9NYJ8 693 aa19.67■□□□□ 0.74
PRDM2-209ENST00000491134 C5orf67F2Z3F1 127 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 SPTLC1O15269 473 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 P4HA2O15460 535 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 KIF4AO95239 1232 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 STAU1O95793 577 aaKnown RBP19.66■□□□□ 0.74
PRDM2-209ENST00000491134 HLA-DRAP01903 254 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 POLR2BP30876 1174 aaKnown RBP19.66■□□□□ 0.74
PRDM2-209ENST00000491134 LRRC52Q8N7C0 313 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 ZNF558Q96NG5 402 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 NKX2-4Q9H2Z4 354 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 AGAP1Q9UPQ3 857 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 FAN1Q9Y2M0 1017 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 CDH23Q9H251 3354 aa19.66■□□□□ 0.74
PRDM2-209ENST00000491134 GTPBP10A4D1E9 387 aaKnown RBP19.65■□□□□ 0.74
PRDM2-209ENST00000491134 NT5C1B-RDH14C9J2C7 533 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 GOLGA6L19H0YKK7 550 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 CDK11BP21127 795 aaKnown RBP19.65■□□□□ 0.74
PRDM2-209ENST00000491134 DNAJB2P25686 324 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 BMPR1AP36894 532 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 OR1G1P47890 313 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 LILRA4P59901 499 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 ERVK-21P61565 698 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 RBP5P82980 135 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 NCOA4Q13772 614 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 DPY19L2P1Q6NXN4 242 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 CREBRFQ8IUR6 639 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 RNF168Q8IYW5 571 aaPredicted RBP19.65■□□□□ 0.74
PRDM2-209ENST00000491134 C17orf80Q9BSJ5 609 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 VN1R3Q9BXE9 311 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 VPS16Q9H269 839 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 MMRN2Q9H8L6 949 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 VRTNQ9H8Y1 702 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 PRG3Q9Y2Y8 225 aaPredicted RBP19.65■□□□□ 0.74
PRDM2-209ENST00000491134 TSC2P49815 1807 aa19.65■□□□□ 0.74
PRDM2-209ENST00000491134 A0A1B0GTH6 734 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 CARNS1A5YM72 827 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 LGALS16A8MUM7 142 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 N4BP1O75113 896 aaKnown RBP19.64■□□□□ 0.73
PRDM2-209ENST00000491134 ASS1P00966 412 aaKnown RBP19.64■□□□□ 0.73
PRDM2-209ENST00000491134 PRKCSHP14314 528 aaPredicted RBP19.64■□□□□ 0.73
PRDM2-209ENST00000491134 ALDH7A1P49419 539 aaKnown RBP19.64■□□□□ 0.73
PRDM2-209ENST00000491134 MYL6P60660 151 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 FANCCQ00597 558 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 MYL7Q01449 175 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 BIRC3Q13489 604 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 LIMS2Q7Z4I7 341 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 FBXL13Q8NEE6 735 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 IGSF21Q96ID5 467 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 NAP1L5Q96NT1 182 aaPredicted RBP19.64■□□□□ 0.73
PRDM2-209ENST00000491134 RTN4Q9NQC3 1192 aaKnown RBP19.64■□□□□ 0.73
PRDM2-209ENST00000491134 RAB20Q9NX57 234 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 MSRAQ9UJ68 235 aa19.64■□□□□ 0.73
PRDM2-209ENST00000491134 ATG2AQ2TAZ0 1938 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 TULP1O00294 542 aaPredicted RBP19.63■□□□□ 0.73
PRDM2-209ENST00000491134 AP5Z1O43299 807 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 B3GAT3O94766 335 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 TPM4P67936 248 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 ANKRD20A12PQ8NF67 263 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 TGS1Q96RS0 853 aaKnown RBP19.63■□□□□ 0.73
PRDM2-209ENST00000491134 COLEC11Q9BWP8 271 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 PLVAPQ9BX97 442 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 APOBEC3GQ9HC16 384 aaKnown RBP19.63■□□□□ 0.73
PRDM2-209ENST00000491134 AAASQ9NRG9 546 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 SPG21Q9NZD8 308 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 ADAM28Q9UKQ2 775 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 RWDD3Q9Y3V2 267 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 MYO7AQ13402 2215 aa19.63■□□□□ 0.73
PRDM2-209ENST00000491134 M0QZQ0 153 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 PHACTR2O75167 634 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 KRT19P08727 400 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 PAX3P23760 479 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 ATICP31939 592 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 PNPLA4P41247 253 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 TAF6P49848 677 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 PLCB3Q01970 1234 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 KCNMA1Q12791 1236 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 SGSM1Q2NKQ1 1148 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 TIGD5Q53EQ6 642 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 SPOUT1Q5T280 376 aaKnown RBP19.62■□□□□ 0.73
PRDM2-209ENST00000491134 KLHL23Q8NBE8 558 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 TAF4BQ92750 862 aa19.62■□□□□ 0.73
PRDM2-209ENST00000491134 ELMO3Q96BJ8 720 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms