RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SGPL1O95470 568 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 CYP1A2P05177 515 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 FAM86B2P0C5J1 330 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 AP3B2Q13367 1082 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 TRABD2AQ86V40 505 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 RIBC1Q8N443 379 aaPredicted RBP20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 RDH13Q8NBN7 331 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 DENND1AQ8TEH3 1009 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 FAM20AQ96MK3 541 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 PARVGQ9HBI0 331 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 VAV3Q9UKW4 847 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 LRCH1Q9Y2L9 728 aa20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 GREB1LQ9C091 1923 aaPredicted RBP20.55■□□□□ 0.88
SNAPC3-206ENST00000490969 SIGLEC16A6NMB1 481 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 EXOC3O60645 756 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 MUTP22033 750 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 VHLP40337 213 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 SESN3P58005 492 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 GRIPAP1Q4V328 841 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 TAF1BQ53T94 588 aaPredicted RBP20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 SPDYAQ5MJ70 313 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 NOP9Q86U38 636 aaKnown RBP20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 GRK7Q8WTQ7 553 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 VTI1AQ96AJ9 217 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 ZNF653Q96CK0 615 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 ZNF70Q9UC06 446 aaPredicted RBP20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 PDK4Q16654 411 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 SLC5A9Q2M3M2 681 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 KHDC1Q4VXA5 237 aaKnown RBP20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 NSMFQ6X4W1 530 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 ZNF720Q7Z2F6 126 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 EPS8L1Q8TE68 723 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 IFT43Q96FT9 208 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 FIZ1Q96SL8 496 aa20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 NOCTQ9UK39 431 aaKnown RBP20.54■□□□□ 0.88
SNAPC3-206ENST00000490969 UBE4BO95155 1302 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 EML1O00423 815 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 NR1H3Q13133 447 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 DLGAP5Q15398 846 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 PDCD2Q16342 344 aaPredicted RBP20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 C4orf50Q6ZRC1 276 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 C1orf186Q6ZWK4 172 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 KIFAP3Q92845 792 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 UBN1Q9NPG3 1134 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 LNPEPQ9UIQ6 1025 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 ZFP69BQ9UJL9 534 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 GTF3C4Q9UKN8 822 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 GRID1Q9ULK0 1009 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 EMSYQ7Z589 1322 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 CNTNAP1P78357 1384 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 MSH4O15457 936 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 PRPF4O43172 522 aaKnown RBP eCLIP20.53■□□□□ 0.883e-6■□□□□ 10.6
SNAPC3-206ENST00000490969 DLG4P78352 724 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 CCDC6Q16204 474 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 CERKLQ49MI3 558 aaPredicted RBP20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 RFWD3Q6PCD5 774 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 KAT5Q92993 513 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 CSRNP1Q96S65 589 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 DCLK3Q9C098 648 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 UVRAGQ9P2Y5 699 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 SCOCQ9UIL1 159 aa20.53■□□□□ 0.88
SNAPC3-206ENST00000490969 GSTTP1A0A1W2PQM5 241 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 RRM1P23921 792 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 RELL1Q8IUW5 271 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 FAM178BQ8IXR5 827 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 CFAP61Q8NHU2 1237 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 HERPUD2Q9BSE4 406 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 TRIM4Q9C037 500 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 TMEM39BQ9GZU3 492 aa20.52■□□□□ 0.88
SNAPC3-206ENST00000490969 CDR2Q01850 454 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 RCN2Q14257 317 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 SLC45A4Q5BKX6 768 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 SNX30Q5VWJ9 437 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 CYP4F22Q6NT55 531 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 TATDN1Q6P1N9 297 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 MIPEPQ99797 713 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 TRABDQ9H4I3 376 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 ACP6Q9NPH0 428 aa20.52■□□□□ 0.87
SNAPC3-206ENST00000490969 EEF2P13639 858 aaKnown RBP20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 SLC18A1P54219 525 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 CETN1Q12798 172 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 STXBP4Q6ZWJ1 553 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 NLRP9Q7RTR0 991 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 OGFOD1Q8N543 542 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 PHC3Q8NDX5 983 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 ATL2Q8NHH9 583 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 MAIP1Q8WWC4 291 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 SAR1AQ9NR31 198 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 EXOC1LA0A1B0GW35 172 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 RAD21O60216 631 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 ABHD2P08910 425 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 SKIP12755 728 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 GCAP28676 217 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 TRAPPC9Q96Q05 1148 aa20.51■□□□□ 0.87
SNAPC3-206ENST00000490969 ASTN2O75129 1339 aaPredicted RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 HNRNPCL1O60812 293 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 GSTA2P09210 222 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 OCRLQ01968 901 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms