RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 TAF4BQ92750 862 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 APBB2Q92870 758 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 TRIM43Q96BQ3 446 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-210ENST00000490808 ZBTB45Q96K62 511 aaPredicted RBP11.02□□□□□ -0.65
HDAC3-210ENST00000490808 AGPAT1Q99943 283 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 ASB7Q9H672 318 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 PDE11AQ9HCR9 933 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 CPSF3Q9UKF6 684 aaKnown RBP11.02□□□□□ -0.65
HDAC3-210ENST00000490808 MRFAP1Q9Y605 127 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 CNTNAP2Q9UHC6 1331 aa11.02□□□□□ -0.65
HDAC3-210ENST00000490808 MICAL3Q7RTP6 2002 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 A0A087WZ62 844 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 A0A087X0T9 212 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 MACROD2A1Z1Q3 448 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 FOXN3O00409 490 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 BAIAP3O94812 1187 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 HLA-DRAP01903 254 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 CXCL10P02778 98 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 IQCF3P0C7M6 154 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 FAM228BP0C875 321 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 GZMAP12544 262 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 TCP1P17987 556 aaKnown RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 COL9A1P20849 921 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 PROZP22891 400 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 THPOP40225 353 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 APBA1Q02410 837 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 CCDC70Q6NSX1 233 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 GJB7Q6PEY0 223 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 CRELD2Q6UXH1 353 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 FAM71AQ8IYT1 594 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 PLEKHO2Q8TD55 490 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 CTNNBL1Q8WYA6 563 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 SHC3Q92529 594 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 TSPAN18Q96SJ8 248 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 POP1Q99575 1024 aaKnown RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 FDXACB1Q9BRP7 624 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 DNAI2Q9GZS0 605 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 IL23AQ9NPF7 189 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 SEPT11Q9NVA2 429 aaKnown RBP11.01□□□□□ -0.65
HDAC3-210ENST00000490808 RNF14Q9UBS8 474 aa11.01□□□□□ -0.65
HDAC3-210ENST00000490808 ZNF263O14978 683 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 RTN2O75298 545 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 TUBBP07437 444 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 TMEM253P0C7T8 217 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 P4HA1P13674 534 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 PAFAH1B1P43034 410 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 YARSP54577 528 aaKnown RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 MRPS6P82932 125 aaKnown RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 PAPD7Q5XG87 772 aaKnown RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 ARHGEF19Q8IW93 802 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 RHOT2Q8IXI1 618 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 THNSL1Q8IYQ7 743 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 KIAA0319LQ8IZA0 1049 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 TTC39CQ8N584 583 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 ZSWIM2Q8NEG5 633 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 TAS1R2Q8TE23 839 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 RSPH1Q8WYR4 309 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 GOLGA1Q92805 767 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 FAM212AQ96EL1 285 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 TRIM11Q96F44 468 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 CCDC94Q9BW85 323 aaPredicted RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 FTHL17Q9BXU8 183 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 IRX2Q9BZI1 471 aaPredicted RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 LACRTQ9GZZ8 138 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 FAM124BQ9H5Z6 455 aaPredicted RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 IFT122Q9HBG6 1241 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 PTPRHQ9HD43 1115 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 ARGLU1Q9NWB6 273 aaPredicted RBP11□□□□□ -0.65
HDAC3-210ENST00000490808 PCDHB2Q9Y5E7 798 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 SCN5AQ14524 2016 aa11□□□□□ -0.65
HDAC3-210ENST00000490808 TTC3P53804 2025 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CTAGE15A4D2H0 777 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 ANKRD62A6NC57 917 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 XPOTO43592 962 aaKnown RBP10.99□□□□□ -0.65
HDAC3-210ENST00000490808 LRRN2O75325 713 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 VTNP04004 478 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CTAGE8P0CG41 777 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 KRT5P13647 590 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 ATICP31939 592 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CYP2C18P33260 490 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CRYBB1P53674 252 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-210ENST00000490808 NCOA4Q13772 614 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CLUL1Q15846 466 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 ZNF618Q5T7W0 954 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 TDRD10Q5VZ19 366 aaKnown RBP10.99□□□□□ -0.65
HDAC3-210ENST00000490808 NOTUMQ6P988 496 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CNKSR3Q6P9H4 555 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 TRIM72Q6ZMU5 477 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CATSPER4Q7RTX7 472 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CTAGE6Q86UF2 777 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 CTAGE4Q8IX94 777 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 MAFAQ8NHW3 353 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-210ENST00000490808 SLC30A5Q8TAD4 765 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 HELQQ8TDG4 1101 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
HDAC3-210ENST00000490808 SEPT8Q92599 483 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms