RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 IFT122Q9HBG6 1241 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 POLD4Q9HCU8 107 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 FANCLQ9NW38 375 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 SPG21Q9NZD8 308 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 TBC1D7Q9P0N9 293 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 ODF2LQ9ULJ1 636 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 PIN4Q9Y237 131 aaKnown RBP8.27□□□□□ -1.09
CLDN1-202ENST00000490800 LZTS1Q9Y250 596 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 NFE2L3Q9Y4A8 694 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 COL4A3BPQ9Y5P4 624 aa8.27□□□□□ -1.09
CLDN1-202ENST00000490800 TRIM49BA6NDI0 452 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 MEIS3P2A8K0S8 358 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 PRR33A8MZF0 331 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 TMEM229AB2RXF0 380 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 PSMA7O14818 248 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 USO1O60763 962 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ZNF623O75123 536 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 HIP1RO75146 1068 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ZIC2O95409 532 aaPredicted RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ATP1A3P13637 1013 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ZNF18P17022 549 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 CCNE1P24864 410 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ALDH7A1P49419 539 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ZNF75DP51815 510 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 POLGP54098 1239 aaPredicted RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 BCAR1P56945 870 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 TPM4P67936 248 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 KCNC3Q14003 757 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 CENPPQ6IPU0 288 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 TTI2Q6NXR4 508 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 LLGL2Q6P1M3 1020 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 EPM2AIP1Q7L775 607 aaPredicted RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 EXOC8Q8IYI6 725 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 SMRP1Q8NCR6 262 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 SLC7A3Q8WY07 619 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ANP32BQ92688 251 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 FAM122AQ96E09 287 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 PDLIM2Q96JY6 352 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 PRIMPOLQ96LW4 560 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 CCDC43Q96MW1 224 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 PPP1R9BQ96SB3 815 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 FIZ1Q96SL8 496 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 CDCA3Q99618 268 aaPredicted RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 DUSP9Q99956 384 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 TIPINQ9BVW5 301 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 DHX33Q9H6R0 707 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 MINDY3Q9H8M7 445 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 PARVGQ9HBI0 331 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 NGRNQ9NPE2 291 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ENTPD7Q9NQZ7 604 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 SAMSN1Q9NSI8 373 aaKnown RBP8.26□□□□□ -1.09
CLDN1-202ENST00000490800 FAM105AQ9NUU6 356 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 SEL1LQ9UBV2 794 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 MUTYHQ9UIF7 546 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 C5orf42Q9H799 3197 aa8.26□□□□□ -1.09
CLDN1-202ENST00000490800 ARID2Q68CP9 1835 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 MYH11P35749 1972 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 ASAP2O43150 1006 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 OFD1O75665 1012 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 CXCL14O95715 111 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 MYBP10242 640 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 HOXA11P31270 313 aaPredicted RBP8.25□□□□□ -1.09
CLDN1-202ENST00000490800 CA8P35219 290 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 PPM1AP35813 382 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 CASP5P51878 434 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 FANCCQ00597 558 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 CCDC173Q0VFZ6 552 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 LAMTOR4Q0VGL1 99 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 BMT2Q1RMZ1 405 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 CDKAL1Q5VV42 579 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 ANKRD40Q6AI12 368 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 ANKRD54Q6NXT1 300 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 SYCE2Q6PIF2 218 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 TMEM184AQ6ZMB5 413 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 MAEAQ7L5Y9 396 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 MYCT1Q8N699 235 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 MRPL43Q8N983 215 aaKnown RBP8.25□□□□□ -1.09
CLDN1-202ENST00000490800 SCFD1Q8WVM8 642 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 PSPC1Q8WXF1 523 aaKnown RBP8.25□□□□□ -1.09
CLDN1-202ENST00000490800 RPGRIP1Q96KN7 1286 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 POP1Q99575 1024 aaKnown RBP8.25□□□□□ -1.09
CLDN1-202ENST00000490800 APOL5Q9BWW9 433 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 MRPL9Q9BYD2 267 aaKnown RBP8.25□□□□□ -1.09
CLDN1-202ENST00000490800 TRIM5Q9C035 493 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 S1PR5Q9H228 398 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 NRDE2Q9H7Z3 1164 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 ETNK1Q9HBU6 452 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 GPRC5CQ9NQ84 441 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 XPNPEP1Q9NQW7 623 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 OLFML3Q9NRN5 406 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 TOR4AQ9NXH8 423 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 INPP5FQ9Y2H2 1132 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 HCN4Q9Y3Q4 1203 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 USP15Q9Y4E8 981 aaPredicted RBP8.25□□□□□ -1.09
CLDN1-202ENST00000490800 PPME1Q9Y570 386 aa8.25□□□□□ -1.09
CLDN1-202ENST00000490800 PCDHB2Q9Y5E7 798 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms