RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 BTBD7Q9P203 1132 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 MOSPD1Q9UJG1 213 aa15.22■□□□□ 0.03
ARHGEF39-205ENST00000490638 SSU72P8A0A1W2PR75 194 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 MTF1Q14872 753 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 NR1I3Q14994 352 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 DUSP28Q4G0W2 176 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 HEATR6Q6AI08 1181 aaKnown RBP15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 FAF2Q96CS3 445 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 FSD1LQ9BXM9 530 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 KCNMB3Q9NPA1 279 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 KCPQ6ZWJ8 1503 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 AP1G2O75843 785 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 GSTA1P08263 222 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 GSTA2P09210 222 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 ACADSBP45954 432 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 FBXO47Q5MNV8 452 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 TTI2Q6NXR4 508 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 INPP4AQ96PE3 977 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 DNAJC17Q9NVM6 304 aaKnown RBP15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 MCF2P10911 925 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 SULT1E1P49888 294 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 SF3A3Q12874 501 aaKnown RBP eCLIP15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 ORC1Q13415 861 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 HSDL1Q3SXM5 330 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 PLEKHA5Q9HAU0 1116 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 BLOC1S4Q9NUP1 217 aa15.21■□□□□ 0.03
ARHGEF39-205ENST00000490638 TPI1P60174 286 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 MYL6P60660 151 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 DEUP1Q05D60 604 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 IKBKEQ14164 716 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 TRIM65Q6PJ69 517 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 MYLK4Q86YV6 388 aaPredicted RBP15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 TMC2Q8TDI7 906 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 CGRRF1Q99675 332 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 PACSIN2Q9UNF0 486 aaPredicted RBP15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 SH3BP1Q9Y3L3 701 aa15.21■□□□□ 0.02
ARHGEF39-205ENST00000490638 CCDC85CA6NKD9 419 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 NFE2Q16621 373 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 KIAA1755Q5JYT7 1200 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 GAD1Q99259 594 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 SERPINB6P35237 376 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 MRPS25P82663 173 aaKnown RBP15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 C10orf120Q5SQS8 335 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 CYP4A22Q5TCH4 519 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZBTB45Q96K62 511 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 PI4K2BG5E9Z4 385 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 H7C4K7 107 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 MCUQ8NE86 351 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 BRI3BPQ8WY22 251 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 CALR3Q96L12 384 aaKnown RBP15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 ERGIC2Q96RQ1 377 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 UVRAGQ9P2Y5 699 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 HDAC6Q9UBN7 1215 aa15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 TTC7AQ9ULT0 858 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF39-205ENST00000490638 CACNA1FO60840 1977 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 FOXN3O00409 490 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 NDUFAB1O14561 156 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 CKMP06732 381 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 SMIM10L2AP0DMW4 78 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 SMIM10L2BP0DMW5 78 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 CYP24A1Q07973 514 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 DHX9Q08211 1270 aaKnown RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZNF235Q14590 738 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZNF280DQ6N043 979 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 ZC3H18Q86VM9 953 aaKnown RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 TLR2O60603 784 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 NCAM1P13591 858 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 TMEM119Q4V9L6 283 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 PCGF5Q86SE9 256 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 PYROXD1Q8WU10 500 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 ASIC4Q96FT7 647 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 MCEEQ96PE7 176 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 DIS3Q9Y2L1 958 aaKnown RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 SNX24Q9Y343 169 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 AP1B1Q10567 949 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 RPS6KA2Q15349 733 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 EFHC1Q5JVL4 640 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 PID1Q7Z2X4 250 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 SLC7A14Q8TBB6 771 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 GMLQ99445 158 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 RABEP2Q9H5N1 569 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 ASB7Q9H672 318 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 A0A0G2JLL6 359 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 CAPN15O75808 1086 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 KLK7P49862 253 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 SLC7A5Q01650 507 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 MYBPC2Q14324 1141 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 CCDC121Q6ZUS5 278 aa15.19■□□□□ 0.02
ARHGEF39-205ENST00000490638 PRRT2Q7Z6L0 340 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms