RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	PCDHB1	Q9Y5F3	818 aa		3.15	□□□□□ -1.91
PUM3-204	ENST00000490444	FAM171A2	A8MVW0	826 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	EXOC5	O00471	708 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	PRPF3	O43395	683 aa	Known RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	ZNF500	O60304	480 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	ENDOD1	O94919	500 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	SCAF4	O95104	1147 aa	Known RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	SCGB1D2	O95969	90 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	PF4V1	P10720	104 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	ZSCAN20	P17040	1043 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	LAG3	P18627	525 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	HK1	P19367	917 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	FPR1	P21462	350 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	BDNF	P23560	247 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	CCND1	P24385	295 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	FLT3LG	P49771	235 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	APBA1	Q02410	837 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	UBE4A	Q14139	1066 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	DCAF17	Q5H9S7	520 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	FAM47A	Q5JRC9	791 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	ANKS6	Q68DC2	871 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	NAIF1	Q69YI7	327 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	CCSAP	Q6IQ19	270 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	B3GNT9	Q6UX72	402 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	TPH2	Q8IWU9	490 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	PQLC1	Q8N2U9	271 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	FBXO18	Q8NFZ0	1043 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	OR52N2	Q8NGI0	321 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	OR5M3	Q8NGP4	307 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	SLC35B2	Q8TB61	432 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	NSUN6	Q8TEA1	469 aa	Known RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	CASKIN2	Q8WXE0	1202 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	JPH3	Q8WXH2	748 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	MRGPRX4	Q96LA9	322 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	GTPBP4	Q9BZE4	634 aa	Known RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	LDAH	Q9H6V9	325 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	SWAP70	Q9UH65	585 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	ZNF180	Q9UJW8	692 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	PNMA8B	Q9ULN7	279 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	ANKRD6	Q9Y2G4	727 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	FRMD4B	Q9Y2L6	1034 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	COL3A1	P02461	1466 aa	Predicted RBP	3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	PNPLA7	Q6ZV29	1317 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	COL4A3	Q01955	1670 aa		3.14	□□□□□ -1.91
PUM3-204	ENST00000490444	GRXCR1	A8MXD5	290 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	CXorf49	A8MYA2	514 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	TRIM24	O15164	1050 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	TSPAN6	O43657	245 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	SGTA	O43765	313 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	ZFPL1	O95159	310 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	PDC	P20941	246 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	LPO	P22079	712 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	NR4A1	P22736	598 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	AKAP5	P24588	427 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	CALR	P27797	417 aa	Known RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	PTTG1IP	P53801	180 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	SLC16A1	P53985	500 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	TAP1	Q03518	808 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	SP140	Q13342	867 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	HDAC1	Q13547	482 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	MYBPC2	Q14324	1141 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	ZRSR2	Q15696	482 aa	Known RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	METTL24	Q5JXM2	366 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	ATAT1	Q5SQI0	421 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	HECTD2	Q5U5R9	776 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	METRNL	Q641Q3	311 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	OTUD7B	Q6GQQ9	843 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	ZNF280D	Q6N043	979 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	USP45	Q70EL2	814 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	EPM2AIP1	Q7L775	607 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	CATIP	Q7Z7H3	387 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	SYT12	Q8IV01	421 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	WDR75	Q8IWA0	830 aa	Known RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	DCBLD1	Q8N8Z6	715 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	IFI44	Q8TCB0	444 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	STON2	Q8WXE9	905 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	KAT5	Q92993	513 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	RAB24	Q969Q5	203 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	HDAC10	Q969S8	669 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	CYFIP2	Q96F07	1278 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	C8orf48	Q96LL4	319 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	CDC5L	Q99459	802 aa	Known RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	MPHOSPH6	Q99547	160 aa	Known RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	C7orf25	Q9BPX7	421 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	CPPED1	Q9BRF8	314 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	PRDM13	Q9H4Q3	707 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	ANLN	Q9NQW6	1124 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	LANCL2	Q9NS86	450 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	SLC23A1	Q9UHI7	598 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	EIF2B4	Q9UI10	523 aa	Known RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	AJAP1	Q9UKB5	411 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	ZBTB21	Q9ULJ3	1066 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	PCDHA13	Q9Y5I0	950 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	SPATA31A6	Q5VVP1	1343 aa		3.13	□□□□□ -1.91
PUM3-204	ENST00000490444	MYADML2	A6NDP7	307 aa		3.12	□□□□□ -1.91
PUM3-204	ENST00000490444	TBKBP1	A7MCY6	615 aa		3.12	□□□□□ -1.91
PUM3-204	ENST00000490444	PJA2	O43164	708 aa		3.12	□□□□□ -1.91

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