RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 IGKV6-21A0A0C4DH24 114 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 ARL5CA6NH57 179 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 FAM86B1E9PN63 330 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 CAVIN2O95810 425 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 RHOP08100 348 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 FAM86B2P0C5J1 330 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 PSMC3P17980 439 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 SMARCA1P28370 1054 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 GDI1P31150 447 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 HOXA11P31270 313 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 SOX9P48436 509 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 SCNN1GP51170 649 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 TARBP2Q15633 366 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 PRSS36Q5K4E3 855 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 DGKKQ5KSL6 1271 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 ZNF746Q6NUN9 644 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 NIPA1Q7RTP0 329 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 CATSPER4Q7RTX7 472 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 LNX1Q8TBB1 728 aaPredicted RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 HNRNPLLQ8WVV9 542 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 PIK3R5Q8WYR1 880 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 LRIG1Q96JA1 1093 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 PGBD1Q96JS3 809 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 FAM167AQ96KS9 214 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 ASB16Q96NS5 453 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 GAD1Q99259 594 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 CHMP4BQ9H444 224 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 ZFP14Q9HCL3 533 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 GABBR1Q9UBS5 961 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 ADAM28Q9UKQ2 775 aa7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 RELNP78509 3460 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 SPAARA0A1B0GVQ0 90 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 WDR27A2RRH5 827 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 IPO5O00410 1097 aaKnown RBP7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 PLEKHA8P1O95397 391 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 CCDC192P0DO97 292 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 SREBF1P36956 1147 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 MLH1P40692 756 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 CCR2P41597 374 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 CDC42EP1Q00587 391 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 RELBQ01201 579 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 CREB5Q02930 508 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 PSMD5Q16401 504 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 UGCGQ16739 394 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 IMMTQ16891 758 aaKnown RBP7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 UVSSAQ2YD98 709 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 C1orf228Q6PIY5 440 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 RAB44Q7Z6P3 723 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 PIP4P1Q86T03 277 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 ZNF410Q86VK4 478 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 SMAP1Q8IYB5 467 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 CHCHD4Q8N4Q1 142 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 SRBD1Q8N5C6 995 aaKnown RBP7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 GSTCDQ8NEC7 633 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 CRYGNQ8WXF5 182 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 TCEAL4Q96EI5 215 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 MSANTD3Q96H12 275 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 CRELD1Q96HD1 420 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 COLEC11Q9BWP8 271 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 ANO3Q9BYT9 981 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 INO80BQ9C086 356 aaPredicted RBP7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 IFT122Q9HBG6 1241 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 SEC63Q9UGP8 760 aaKnown RBP7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 PCDHA10Q9Y5I2 948 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 ABCA12Q86UK0 2595 aa7.98□□□□□ -1.13
PDLIM1-203ENST00000490391 MYBPHLA2RUH7 354 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 SLC38A8A6NNN8 435 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 PATE3B3GLJ2 98 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 PSAPP07602 524 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 ITGB7P26010 798 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 VIPR2P41587 438 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 MFAP1P55081 439 aaKnown RBP7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 SNRPNP63162 240 aaKnown RBP7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 SIM1P81133 766 aaPredicted RBP7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 PRKCEQ02156 737 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 RAB33AQ14088 237 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 FOXR1Q6PIV2 292 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 RTL10Q7L3V2 364 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 KSR1Q8IVT5 923 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 SYNPOQ8N3V7 929 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 DEPDC1BQ8WUY9 529 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 RABGGTAQ92696 567 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 SMARCD2Q92925 531 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 RSPRY1Q96DX4 576 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 ZNF837Q96EG3 531 aaPredicted RBP7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 ZSWIM3Q96MP5 696 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 MAP3K14Q99558 947 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 HNRNPABQ99729 332 aaKnown RBP7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 PAAF1Q9BRP4 392 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 MKNK1Q9BUB5 465 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 DSCC1Q9BVC3 393 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 MINDY3Q9H8M7 445 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 TRPV4Q9HBA0 871 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 RAXQ9Y2V3 346 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 IPPQ9Y573 584 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 RAI2Q9Y5P3 530 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 SF3B1O75533 1304 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 THADAQ6YHU6 1953 aa7.97□□□□□ -1.13
PDLIM1-203ENST00000490391 hCG_1642624A0A1W2PR95 340 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms