RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 EDEM3Q9BZQ6 932 aa14.39□□□□□ -0.11
TRAIP-210ENST00000489948 TBC1D13Q9NVG8 400 aa14.39□□□□□ -0.11
TRAIP-210ENST00000489948 MIOSQ9NXC5 875 aa14.39□□□□□ -0.11
TRAIP-210ENST00000489948 IMPACTQ9P2X3 320 aa14.39□□□□□ -0.11
TRAIP-210ENST00000489948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAIP-210ENST00000489948 KIAA1671Q9BY89 1806 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 CARNS1A5YM72 827 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 TMEM189-UBE2V1I3L0A0 370 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 PHACTR2O75167 634 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 NOL4O94818 638 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 SLC9A1P19634 815 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 POLR2BP30876 1174 aaKnown RBP14.38□□□□□ -0.11
TRAIP-210ENST00000489948 GCNT1Q02742 428 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
TRAIP-210ENST00000489948 TRPC3Q13507 836 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 ZNF699Q32M78 642 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 KLHDC7AQ5VTJ3 777 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 ENOSF1Q7L5Y1 443 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 OTOP2Q7RTS6 562 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 CMTR2Q8IYT2 770 aaKnown RBP14.38□□□□□ -0.11
TRAIP-210ENST00000489948 CCDC150Q8NCX0 1101 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 NEK11Q8NG66 645 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 DDX27Q96GQ7 796 aaKnown RBP14.38□□□□□ -0.11
TRAIP-210ENST00000489948 NT5C1BQ96P26 610 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 NAA15Q9BXJ9 866 aaKnown RBP14.38□□□□□ -0.11
TRAIP-210ENST00000489948 CEP72Q9P209 647 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 INPP5FQ9Y2H2 1132 aa14.38□□□□□ -0.11
TRAIP-210ENST00000489948 DLL1O00548 723 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 GJB5O95377 273 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 CST3P01034 146 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-210ENST00000489948 POMCP01189 267 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 GYPCP04921 128 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 UCHL3P15374 230 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 TRIM21P19474 475 aaKnown RBP14.37□□□□□ -0.11
TRAIP-210ENST00000489948 TBXAS1P24557 533 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-210ENST00000489948 MAGEA10P43363 369 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-210ENST00000489948 KLK7P49862 253 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 MYL6P60660 151 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 HTRA4P83105 476 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-210ENST00000489948 MYO1EQ12965 1108 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 ARID5BQ14865 1188 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 UPP1Q16831 310 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 WDR44Q5JSH3 913 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 TMC6Q7Z403 805 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 JAKMIP2Q96AA8 810 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 TMEM175Q9BSA9 504 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 NIF3L1Q9GZT8 377 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 FAM207AQ9NSI2 230 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-210ENST00000489948 MYO6Q9UM54 1294 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 AGAP1Q9UPQ3 857 aa14.37□□□□□ -0.11
TRAIP-210ENST00000489948 R3HCC1Q9Y3T6 440 aaKnown RBP14.37□□□□□ -0.11
TRAIP-210ENST00000489948 TBKBP1A7MCY6 615 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 ZBBXA8MT70 800 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 PODXLO00592 558 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 EPHB6O15197 1021 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 KRT19P08727 400 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
TRAIP-210ENST00000489948 AARSP49588 968 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAIP-210ENST00000489948 TAF6P49848 677 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 CCDC173Q0VFZ6 552 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 SV2CQ496J9 727 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 PHLDB3Q6NSJ2 640 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 COLGALT2Q8IYK4 626 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 HPDLQ96IR7 371 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 PCMTD1Q96MG8 357 aaPredicted RBP14.36□□□□□ -0.11
TRAIP-210ENST00000489948 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 APOBEC3GQ9HC16 384 aaKnown RBP14.36□□□□□ -0.11
TRAIP-210ENST00000489948 GDAP2Q9NXN4 497 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 CXXC1Q9P0U4 656 aaPredicted RBP14.36□□□□□ -0.11
TRAIP-210ENST00000489948 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
TRAIP-210ENST00000489948 GOLGA6L6A8MZA4 724 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 PPEF2O14830 753 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 B4GALT3O60512 393 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 MFAP3LO75121 409 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 LRRN2O75325 713 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 TPM1P09493 284 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 P4HA1P13674 534 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 ASPAP45381 313 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 GATMP50440 423 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 CLCNKBP51801 687 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 JAM2P57087 298 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 RNASELQ05823 741 aaKnown RBP14.35□□□□□ -0.11
TRAIP-210ENST00000489948 PTPN21Q16825 1174 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 ZNF667Q5HYK9 610 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 LIMS2Q7Z4I7 341 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 CNGA4Q8IV77 575 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 FMNL3Q8IVF7 1028 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
TRAIP-210ENST00000489948 BAP1Q92560 729 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 PPP1R9BQ96SB3 815 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 GDF15Q99988 308 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 PI4K2AQ9BTU6 479 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 NUCKS1Q9H1E3 243 aaKnown RBP14.35□□□□□ -0.11
TRAIP-210ENST00000489948 NUB1Q9Y5A7 615 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 SLC4A7Q9Y6M7 1214 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
TRAIP-210ENST00000489948 CASTOR2A6NHX0 329 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms