RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 GGPS1O95749 300 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 GLI1P08151 1106 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 SPATA31D3P0C874 917 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 DRD4P21917 467 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 LACTBP83111 547 aaPredicted RBP10.46□□□□□ -0.74
NOD1-208ENST00000489614 PLA2G4FQ68DD2 849 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 SWSAP1Q6NVH7 229 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 SPATA31D4Q6ZUB0 917 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 CCDC80Q76M96 950 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 GET4Q7L5D6 327 aaPredicted RBP10.46□□□□□ -0.74
NOD1-208ENST00000489614 TAS1R3Q7RTX0 852 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 SCFD2Q8WU76 684 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 CENPOQ9BU64 300 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 LACRTQ9GZZ8 138 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 VPS16Q9H269 839 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 PARVGQ9HBI0 331 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 DMAP1Q9NPF5 467 aaPredicted RBP10.46□□□□□ -0.74
NOD1-208ENST00000489614 ZNF302Q9NR11 478 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 BARX2Q9UMQ3 279 aaPredicted RBP10.46□□□□□ -0.74
NOD1-208ENST00000489614 SLC12A4Q9UP95 1085 aa10.46□□□□□ -0.74
NOD1-208ENST00000489614 CFAP73A6NFT4 308 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 SHBGP04278 402 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 HOXC8P31273 242 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 MSH2P43246 934 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 CLCN2P51788 898 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 MYBPC2Q14324 1141 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 TAF1CQ15572 869 aaPredicted RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 MAP7D1Q3KQU3 841 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 TRIM50Q86XT4 487 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 SEPT1Q8WYJ6 367 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 P3H4Q92791 437 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 C16orf70Q9BSU1 422 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 DDX23Q9BUQ8 820 aaKnown RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 SLC12A6Q9UHW9 1150 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 KAT6AQ92794 2004 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 ADGRA3Q8IWK6 1321 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 TMEM221A6NGB7 291 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 KCNJ18B7U540 433 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 VIMP08670 466 aaKnown RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 SMPD1P17405 629 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 COPB1P53618 953 aaKnown RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 SESN3P58005 492 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 RNASE9P60153 205 aaKnown RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 IGBP1P78318 339 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 PLOD1Q02809 727 aaPredicted RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 ALCAMQ13740 583 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 KCNJ12Q14500 433 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 KNOP1Q1ED39 458 aaKnown RBP10.45□□□□□ -0.74
NOD1-208ENST00000489614 DUSP28Q4G0W2 176 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 TRPM8Q7Z2W7 1104 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 ARHGAP18Q8N392 663 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 ATP11CQ8NB49 1132 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 SOCS4Q8WXH5 440 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 COPS5Q92905 334 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 GBP5Q96PP8 586 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 TRAIPQ9BWF2 469 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 ZFYVE28Q9HCC9 887 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 Q9Y3F1 56 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 ZNF711Q9Y462 761 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 COL1A2P08123 1366 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 HTTP42858 3142 aa10.45□□□□□ -0.74
NOD1-208ENST00000489614 TMCC1O94876 653 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 GNA14O95837 355 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 PIGRP01833 764 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ALADP13716 330 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 TCF7P36402 384 aaPredicted RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 SLC26A2P50443 739 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 MAGOHP61326 146 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 SNRPFP62306 86 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 BTG3Q14201 252 aaPredicted RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 LBRQ14739 615 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 LRRC41Q15345 812 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 OR52E8Q6IFG1 317 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ZNF365Q70YC5 407 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 CREG2Q8IUH2 290 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 TMEM161BQ8NDZ6 487 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 FBF1Q8TES7 1133 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 CAVIN3Q969G5 261 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 MAGOHBQ96A72 148 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 DDX50Q9BQ39 737 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 CARD9Q9H257 536 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 HAUS4Q9H6D7 363 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 TYW1Q9NV66 732 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 ETNK2Q9NVF9 386 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ARHGAP28Q9P2N2 729 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 SCOCQ9UIL1 159 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 INTUQ9ULD6 942 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 A0A1W2PQC6 194 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 DYTNA2CJ06 578 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 ARHGEF35A5YM69 484 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 RCCD1A6NED2 376 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 LGALS16A8MUM7 142 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 USO1O60763 962 aaKnown RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 MAFO75444 373 aaPredicted RBP10.44□□□□□ -0.74
NOD1-208ENST00000489614 DGAT1O75907 488 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 APLP1P51693 650 aa10.44□□□□□ -0.74
NOD1-208ENST00000489614 NPEPPSP55786 919 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms