RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 E9PMD0 336 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 TOM1L1O75674 476 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 U2AF2P26368 475 aaKnown RBP eCLIP13.03□□□□□ -0.32
SFXN3-207ENST00000489434 TARSP26639 723 aaKnown RBP13.03□□□□□ -0.32
SFXN3-207ENST00000489434 PRPHP41219 470 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.32
SFXN3-207ENST00000489434 TANGO2Q6ICL3 276 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 DTHD1Q6ZMT9 781 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 SUSD3Q96L08 255 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 ZMAT2Q96NC0 199 aaKnown RBP13.03□□□□□ -0.32
SFXN3-207ENST00000489434 RUSC1Q9BVN2 902 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 OXCT2Q9BYC2 517 aaPredicted RBP13.03□□□□□ -0.32
SFXN3-207ENST00000489434 HEBP1Q9NRV9 189 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 AFF4Q9UHB7 1163 aaKnown RBP13.03□□□□□ -0.32
SFXN3-207ENST00000489434 FBXL5Q9UKA1 691 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 MYH11P35749 1972 aa13.03□□□□□ -0.32
SFXN3-207ENST00000489434 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
SFXN3-207ENST00000489434 H0YCG3 227 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 SLC16A4O15374 487 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 CLDN3O15551 220 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 TBC1D4O60343 1298 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 CPB1P15086 417 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 PROZP22891 400 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.33
SFXN3-207ENST00000489434 MRPL58Q14197 206 aaKnown RBP13.02□□□□□ -0.33
SFXN3-207ENST00000489434 NBR1Q14596 966 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 ZRSR1Q15695 479 aaKnown RBP13.02□□□□□ -0.33
SFXN3-207ENST00000489434 FAM78AQ5JUQ0 283 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 RINT1Q6NUQ1 792 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 DAW1Q8N136 415 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 DCLK2Q8N568 766 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 KCTD17Q8N5Z5 321 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 SPIRE2Q8WWL2 714 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 C18orf25Q96B23 403 aaPredicted RBP13.02□□□□□ -0.33
SFXN3-207ENST00000489434 CDK5RAP3Q96JB5 506 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 TBC1D32Q96NH3 1257 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
SFXN3-207ENST00000489434 IER2Q9BTL4 223 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 PLA2G2FQ9BZM2 168 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 GPR88Q9GZN0 384 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 SLITRK6Q9H5Y7 841 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 ASAH2Q9NR71 780 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 PCDHB6Q9Y5E3 794 aa13.02□□□□□ -0.33
SFXN3-207ENST00000489434 TPRP12270 2363 aaKnown RBP13.02□□□□□ -0.33
SFXN3-207ENST00000489434 SEC24AO95486 1093 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 CLTAP09496 248 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 MYL4P12829 197 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 PSMC3P17980 439 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 GUCY2CP25092 1073 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 NRLP54845 237 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 TWF1Q12792 350 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 PLD1Q13393 1074 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 GRM2Q14416 872 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 KYAT1Q16773 422 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 PRSS36Q5K4E3 855 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 ZPBP2Q6X784 338 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 TAS1R3Q7RTX0 852 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 USP37Q86T82 979 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 ZBTB44Q8NCP5 570 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 DEPDC1BQ8WUY9 529 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 E2F7Q96AV8 911 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 TCEAL4Q96EI5 215 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 BICD1Q96G01 975 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 ASB16Q96NS5 453 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 PLEKHA5Q9HAU0 1116 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 TRPV5Q9NQA5 729 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 KCND2Q9NZV8 630 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 RAB23Q9ULC3 237 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 NDRG2Q9UN36 371 aaKnown RBP13.01□□□□□ -0.33
SFXN3-207ENST00000489434 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
SFXN3-207ENST00000489434 SMG5Q9UPR3 1016 aaKnown RBP13.01□□□□□ -0.33
SFXN3-207ENST00000489434 SFI1A8K8P3 1242 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 PP2D1A8MPX8 630 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 ZNF263O14978 683 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 XPOTO43592 962 aaKnown RBP13□□□□□ -0.33
SFXN3-207ENST00000489434 PLS3P13797 630 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 SCP2P22307 547 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 GDI1P31150 447 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 TOB1P50616 345 aaPredicted RBP13□□□□□ -0.33
SFXN3-207ENST00000489434 YWHAHQ04917 246 aaPredicted RBP13□□□□□ -0.33
SFXN3-207ENST00000489434 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 MTAPQ13126 283 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 MAPK7Q13164 816 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 SLC10A6Q3KNW5 377 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 MCTP1Q6DN14 999 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 YAF2Q8IY57 180 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 DDX12PQ92771 950 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 ZBTB45Q96K62 511 aaPredicted RBP13□□□□□ -0.33
SFXN3-207ENST00000489434 EPC1Q9H2F5 836 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 PRMT8Q9NR22 394 aaPredicted RBP13□□□□□ -0.33
SFXN3-207ENST00000489434 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
SFXN3-207ENST00000489434 COL4A3Q01955 1670 aa12.99□□□□□ -0.33
SFXN3-207ENST00000489434 PRR5-ARHGAP8B1AHC4 643 aa12.99□□□□□ -0.33
SFXN3-207ENST00000489434 ABLIM1O14639 778 aa12.99□□□□□ -0.33
SFXN3-207ENST00000489434 OAZ2O95190 189 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms