RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MCPH1Q8NEM0 835 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 RSPRY1Q96DX4 576 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 CCDC113Q9H0I3 377 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 TRPV4Q9HBA0 871 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 ZSWIM6Q9HCJ5 1215 aa17.8■□□□□ 0.44
USP48-210ENST00000489108 FRYQ5TBA9 3013 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 SMIM28A0A1B0GU29 152 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 SLC38A8A6NNN8 435 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 KPNA1P52294 538 aaPredicted RBP17.79■□□□□ 0.44
USP48-210ENST00000489108 TWF1Q12792 350 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 TEAD2Q15562 447 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 CALCRLQ16602 461 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 DCAF4L1Q3SXM0 396 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 GPIHBP1Q8IV16 184 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 ELMOD1Q8N336 334 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 C12orf50Q8NA57 414 aaPredicted RBP17.79■□□□□ 0.44
USP48-210ENST00000489108 SH2B1Q9NRF2 756 aaPredicted RBP17.79■□□□□ 0.44
USP48-210ENST00000489108 FBXL5Q9UKA1 691 aa17.79■□□□□ 0.44
USP48-210ENST00000489108 H7C4K7 107 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 ZNF806P0C7X5 589 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 SPATA31C1P0DKV0 1188 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 XBP1P17861 261 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 NR5A1Q13285 461 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 MRPL58Q14197 206 aaKnown RBP17.78■□□□□ 0.44
USP48-210ENST00000489108 NT5DC1Q5TFE4 455 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 TPGS2Q68CL5 300 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 TXNDC11Q6PKC3 985 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 WDR5BQ86VZ2 330 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 YAF2Q8IY57 180 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 TTC8Q8TAM2 541 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 DEPTORQ8TB45 409 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 C8orf33Q9H7E9 229 aaPredicted RBP17.78■□□□□ 0.44
USP48-210ENST00000489108 ATRXP46100 2492 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 FAM208BQ5VWN6 2430 aa17.78■□□□□ 0.44
USP48-210ENST00000489108 PODXLO00592 558 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 SYN3O14994 580 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 CHADO15335 359 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 PROS1P07225 676 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 EPHA5P54756 1037 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 CTXN3Q4LDR2 81 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 DGKKQ5KSL6 1271 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 STPG1Q5TH74 334 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 MSANTD3Q96H12 275 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 KIFC3Q9BVG8 833 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 SLITRK6Q9H5Y7 841 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 POLD4Q9HCU8 107 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 ASAH2Q9NR71 780 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 SPAG17Q6Q759 2223 aa17.77■□□□□ 0.44
USP48-210ENST00000489108 MYBPHLA2RUH7 354 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 SPECC1L-ADORA2AF8WAN1 911 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 KCNK5O95279 499 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 HOXA6P31267 233 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 NAMPTP43490 491 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 ATF7IP2Q5U623 682 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 C1orf228Q6PIY5 440 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 ALKAL1Q6UXT8 129 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 CATSPER3Q86XQ3 398 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 CEP120Q8N960 986 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 LEMD2Q8NC56 503 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 SHKBP1Q8TBC3 707 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 E2F7Q96AV8 911 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 GPR88Q9GZN0 384 aa17.76■□□□□ 0.43
USP48-210ENST00000489108 AFF4Q9UHB7 1163 aaKnown RBP17.76■□□□□ 0.43
USP48-210ENST00000489108 WNT7AO00755 349 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 MED24O75448 989 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 HOXB3P14651 431 aaPredicted RBP17.75■□□□□ 0.43
USP48-210ENST00000489108 CYP11B2P19099 503 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 CTHP32929 405 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 PXNP49023 591 aaPredicted RBP17.75■□□□□ 0.43
USP48-210ENST00000489108 OSTNP61366 133 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 SCRN1Q12765 414 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 PON2Q15165 354 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 XKR4Q5GH76 650 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 PADI6Q6TGC4 694 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 RNF19BQ6ZMZ0 732 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 KBTBD6Q86V97 674 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 LOXL4Q96JB6 756 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 ZMAT2Q96NC0 199 aaKnown RBP17.75■□□□□ 0.43
USP48-210ENST00000489108 LRRC3BQ96PB8 259 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 MTMR9Q96QG7 549 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 NACC1Q96RE7 527 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 LSM14BQ9BX40 385 aaKnown RBP17.75■□□□□ 0.43
USP48-210ENST00000489108 SMOC1Q9H4F8 434 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 GTSE1Q9NYZ3 720 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 NUB1Q9Y5A7 615 aa17.75■□□□□ 0.43
USP48-210ENST00000489108 A0A1W2PRU2 124 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 EXTL3O43909 919 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 CDKL5O76039 1030 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 EPN2O95208 641 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 KRT2P35908 639 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 RAP1GAPP47736 663 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 YARSP54577 528 aaKnown RBP17.74■□□□□ 0.43
USP48-210ENST00000489108 FCHO2Q0JRZ9 810 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 CACNA2D4Q7Z3S7 1137 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 RALGPS2Q86X27 583 aaPredicted RBP17.74■□□□□ 0.43
USP48-210ENST00000489108 ARID3BQ8IVW6 561 aaPredicted RBP17.74■□□□□ 0.43
USP48-210ENST00000489108 FAM200AQ8TCP9 573 aa17.74■□□□□ 0.43
USP48-210ENST00000489108 GAB3Q8WWW8 586 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms