RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SMARCAD1Q9H4L7 1026 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 IL23AQ9NPF7 189 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 TRMT13Q9NUP7 481 aaKnown RBP5.77□□□□□ -1.49
SF3A3-207ENST00000488934 SLAMF8Q9P0V8 285 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 ADAMTS1Q9UHI8 967 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 TMEM59LQ9UK28 342 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 TPCN1Q9ULQ1 816 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 LIMCH1Q9UPQ0 1083 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 KIF3AQ9Y496 699 aa5.77□□□□□ -1.49
SF3A3-207ENST00000488934 CCDC194A0A1B0GVG4 234 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 RRN3P2A6NIE6 340 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 SLC22A31A6NKX4 558 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
SF3A3-207ENST00000488934 EFCAB14O75071 495 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 BAIAP3O94812 1187 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 IMPDH2P12268 514 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 CSF2RAP15509 400 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 PTGS1P23219 599 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 VAMP1P23763 118 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 CYP2C18P33260 490 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 MCM2P49736 904 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 HMGN5P82970 282 aaKnown RBP5.76□□□□□ -1.49
SF3A3-207ENST00000488934 SP2Q02086 613 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 SP4Q02446 784 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 SAFBQ15424 915 aaKnown RBP eCLIP5.76□□□□□ -1.49
SF3A3-207ENST00000488934 ME3Q16798 604 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 PRR16Q569H4 304 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 MIS18BP1Q6P0N0 1132 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 TAF2Q6P1X5 1199 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 FAM43BQ6ZT52 329 aaPredicted RBP5.76□□□□□ -1.49
SF3A3-207ENST00000488934 LRRC8DQ7L1W4 858 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 PLPPR4Q7Z2D5 763 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 TBCKQ8TEA7 893 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 CRYGNQ8WXF5 182 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 KAT2BQ92831 832 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 RNF34Q969K3 372 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 PGBD1Q96JS3 809 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 FAM167AQ96KS9 214 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 RIT2Q99578 217 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 SLC38A3Q99624 504 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 PHF20Q9BVI0 1012 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 DUSP15Q9H1R2 295 aaPredicted RBP5.76□□□□□ -1.49
SF3A3-207ENST00000488934 AGO4Q9HCK5 861 aaKnown RBP5.76□□□□□ -1.49
SF3A3-207ENST00000488934 TMEM260Q9NX78 707 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 UBP1Q9NZI7 540 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 ORC3Q9UBD5 711 aaPredicted RBP5.76□□□□□ -1.49
SF3A3-207ENST00000488934 HDAC6Q9UBN7 1215 aa5.76□□□□□ -1.49
SF3A3-207ENST00000488934 SCN5AQ14524 2016 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 IGLV3-22A0A075B6J6 115 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 FAM86B1E9PN63 330 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 M0QZ92 97 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SCAMP3O14828 347 aaKnown RBP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 DKC1O60832 514 aaKnown RBP eCLIP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 ATP9AO75110 1047 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 FGBP02675 491 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 GLI1P08151 1106 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 FAM86B2P0C5J1 330 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 IQCF3P0C7M6 154 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SMIM10L2AP0DMW4 78 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SMIM10L2BP0DMW5 78 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 CYP2C9P11712 490 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SRFP11831 508 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 ITGB8P26012 769 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 HOXC8P31273 242 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SFNP31947 248 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 KRT2P35908 639 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 STAT5BP51692 787 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 JAK3P52333 1124 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 CCL23P55773 120 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 ACTR2P61160 394 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 EGR3Q06889 387 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 PPFIA1Q13136 1202 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SHHQ15465 462 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 GAB4Q2WGN9 574 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 Q4G0T1 1027 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 UTP14CQ5TAP6 766 aaKnown RBP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 CDCP2Q5VXM1 449 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 OVOS1Q6IE37 1185 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 GK5Q6ZS86 529 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 NLRC3Q7RTR2 1065 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 NEK8Q86SG6 692 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 RPAINQ86UA6 219 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SERINC5Q86VE9 423 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SLITRK4Q8IW52 837 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 FAM184AQ8NB25 1140 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 NSUN7Q8NE18 718 aaKnown RBP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 RDM1Q8NG50 284 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 ENOX1Q8TC92 643 aaKnown RBP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 HERVK_113Q902F9 699 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 ATP6V0A1Q93050 837 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 SLC9A7Q96T83 725 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.75□□□□□ -1.49
SF3A3-207ENST00000488934 TEKT3Q9BXF9 490 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 BACH2Q9BYV9 841 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 WNT8AQ9H1J5 351 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 ZNF302Q9NR11 478 aa5.75□□□□□ -1.49
SF3A3-207ENST00000488934 TUBE1Q9UJT0 475 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms