RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CLEC1BQ9P126 229 aa13.96□□□□□ -0.17
PHF1-210ENST00000488767 REV3LO60673 3130 aa13.96□□□□□ -0.18
PHF1-210ENST00000488767 MEFVO15553 781 aaPredicted RBP13.95□□□□□ -0.18
PHF1-210ENST00000488767 MBTPS2O43462 519 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 EXOC3O60645 756 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
PHF1-210ENST00000488767 TNNC2P02585 160 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 PNPLA4P41247 253 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 BRCC3P46736 316 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 STK4Q13043 487 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 SNW1Q13573 536 aaKnown RBP13.95□□□□□ -0.18
PHF1-210ENST00000488767 KCNC3Q14003 757 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 SNRNP35Q16560 246 aaKnown RBP13.95□□□□□ -0.18
PHF1-210ENST00000488767 LIN9Q5TKA1 542 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 CRELD2Q6UXH1 353 aaPredicted RBP13.95□□□□□ -0.18
PHF1-210ENST00000488767 PALB2Q86YC2 1186 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 GLYCTKQ8IVS8 523 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 SLC22A17Q8WUG5 538 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 HDAC7Q8WUI4 952 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 TMEM174Q8WUU8 243 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 SMARCE1Q969G3 411 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 ANKRD36BP1Q96IX9 119 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 SUSD3Q96L08 255 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 ZNF560Q96MR9 790 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 NECTIN4Q96NY8 510 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 GSDMAQ96QA5 445 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 FNBP1Q96RU3 617 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 OXCT2Q9BYC2 517 aaPredicted RBP13.95□□□□□ -0.18
PHF1-210ENST00000488767 PLEKHA4Q9H4M7 779 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 PRKAG3Q9UGI9 489 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 ATG2AQ2TAZ0 1938 aa13.95□□□□□ -0.18
PHF1-210ENST00000488767 A0A0C4DFX4 3053 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 I3L4J1 428 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 ODC1P11926 461 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 EPCAMP16422 314 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 TKTP29401 623 aaKnown RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 MTHFRP42898 656 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 TAF6P49848 677 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 UBE2HP62256 183 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 RBM10P98175 930 aaKnown RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 SMAD2Q15796 467 aaKnown RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 SV2CQ496J9 727 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 VARS2Q5ST30 1063 aaKnown RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 C9orf57Q5W0N0 161 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 ZNF280DQ6N043 979 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 PRSS55Q6UWB4 352 aaPredicted RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 C12orf56Q8IXR9 622 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 KIAA0895Q8NCT3 520 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 C3orf58Q8NDZ4 430 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 LNX1Q8TBB1 728 aaPredicted RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 MAN1C1Q9NR34 630 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 BRWD1Q9NSI6 2320 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 MTRRQ9UBK8 725 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 ITGA11Q9UKX5 1188 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 DSEQ9UL01 958 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 FRMD4BQ9Y2L6 1034 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 USP15Q9Y4E8 981 aaPredicted RBP13.94□□□□□ -0.18
PHF1-210ENST00000488767 BACE2Q9Y5Z0 518 aa13.94□□□□□ -0.18
PHF1-210ENST00000488767 SPTBN5Q9NRC6 3674 aaKnown RBP13.93□□□□□ -0.18
PHF1-210ENST00000488767 DLL1O00548 723 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 PDXKO00764 312 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 CLIC2O15247 247 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 TGFB1I1O43294 461 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 KRT19P08727 400 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 IL9P15248 144 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
PHF1-210ENST00000488767 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
PHF1-210ENST00000488767 OR1D2P34982 312 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 HOXD13P35453 343 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 GUCY2FP51841 1108 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 YWHAHQ04917 246 aaPredicted RBP13.93□□□□□ -0.18
PHF1-210ENST00000488767 PNOCQ13519 176 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 STIM1Q13586 685 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 CBX2Q14781 532 aaPredicted RBP13.93□□□□□ -0.18
PHF1-210ENST00000488767 DUOXA2Q1HG44 320 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 CTXN3Q4LDR2 81 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 ATAT1Q5SQI0 421 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 RARS2Q5T160 578 aaKnown RBP13.93□□□□□ -0.18
PHF1-210ENST00000488767 METTL23Q86XA0 190 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 CBWD2Q8IUF1 395 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 SPATA20Q8TB22 786 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 GBP4Q96PP9 640 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 COL25A1Q9BXS0 654 aaPredicted RBP13.93□□□□□ -0.18
PHF1-210ENST00000488767 ADAM7Q9H2U9 754 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 PDE11AQ9HCR9 933 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 CDY1Q9Y6F8 540 aa13.93□□□□□ -0.18
PHF1-210ENST00000488767 M0QZQ0 153 aa13.92□□□□□ -0.18
PHF1-210ENST00000488767 TGM5O43548 720 aa13.92□□□□□ -0.18
PHF1-210ENST00000488767 DLATP10515 647 aaKnown RBP13.92□□□□□ -0.18
PHF1-210ENST00000488767 TNNI1P19237 187 aa13.92□□□□□ -0.18
PHF1-210ENST00000488767 ELF1P32519 619 aa13.92□□□□□ -0.18
PHF1-210ENST00000488767 LILRA4P59901 499 aa13.92□□□□□ -0.18
PHF1-210ENST00000488767 RBP5P82980 135 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms