RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 SPAG1Q07617 926 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 TMEM119Q4V9L6 283 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 CYP4A22Q5TCH4 519 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 LARP1BQ659C4 914 aaKnown RBP16.7■□□□□ 0.26
TRIM50-203ENST00000488217 IQCEQ6IPM2 695 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 KCNN1Q92952 543 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 ELSPBP1Q96BH3 223 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 BCO2Q9BYV7 579 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
TRIM50-203ENST00000488217 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 MTF2Q9Y483 593 aaPredicted RBP16.7■□□□□ 0.26
TRIM50-203ENST00000488217 R4GN57 208 aa16.7■□□□□ 0.26
TRIM50-203ENST00000488217 TDRD15B5MCY1 1934 aaKnown RBP16.7■□□□□ 0.26
TRIM50-203ENST00000488217 TTC26A0AVF1 554 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 OAZ2O95190 189 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 CYP3A5P20815 502 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 CD72P21854 359 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 SCP2P22307 547 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 MCM2P49736 904 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 NCKAP1LP55160 1127 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
TRIM50-203ENST00000488217 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 KYAT1Q16773 422 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 PRSS36Q5K4E3 855 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 ZNF280DQ6N043 979 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 ELMOD1Q8N336 334 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 MYCT1Q8N699 235 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 BICD1Q96G01 975 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 CALML4Q96GE6 196 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 OXCT2Q9BYC2 517 aaPredicted RBP16.69■□□□□ 0.26
TRIM50-203ENST00000488217 TUBGCP4Q9UGJ1 667 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 ODF2LQ9ULJ1 636 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 SMC3Q9UQE7 1217 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 INSL5Q9Y5Q6 135 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.69■□□□□ 0.26
TRIM50-203ENST00000488217 C2orf16Q68DN1 1984 aa16.69■□□□□ 0.26
TRIM50-203ENST00000488217 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 M0QZQ0 153 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 CXCL8P10145 99 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 CEBPBP17676 345 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 LRPAP1P30533 357 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 DHX8Q14562 1220 aaKnown RBP16.68■□□□□ 0.26
TRIM50-203ENST00000488217 UBXN2BQ14CS0 331 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 FAM78AQ5JUQ0 283 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 ZBTB41Q5SVQ8 909 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 RNF19BQ6ZMZ0 732 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 PDZD4Q76G19 769 aaPredicted RBP16.68■□□□□ 0.26
TRIM50-203ENST00000488217 MAML2Q8IZL2 1156 aaPredicted RBP16.68■□□□□ 0.26
TRIM50-203ENST00000488217 TCEAL4Q96EI5 215 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 ZFP14Q9HCL3 533 aa16.68■□□□□ 0.26
TRIM50-203ENST00000488217 SPATA6Q9NWH7 488 aaPredicted RBP16.68■□□□□ 0.26
TRIM50-203ENST00000488217 UBQLN1Q9UMX0 589 aaKnown RBP16.68■□□□□ 0.26
TRIM50-203ENST00000488217 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
TRIM50-203ENST00000488217 NCAM2O15394 837 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
TRIM50-203ENST00000488217 ADRB2P07550 413 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 TNFSF9P41273 254 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 CCR2P41597 374 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 LIG4P49917 911 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 YWHAHQ04917 246 aaPredicted RBP16.67■□□□□ 0.26
TRIM50-203ENST00000488217 TWF1Q12792 350 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 ZC3H14Q6PJT7 736 aaKnown RBP16.67■□□□□ 0.26
TRIM50-203ENST00000488217 ZNF852Q6ZMS4 543 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 USP37Q86T82 979 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 GPBP1Q86WP2 473 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 HS6ST3Q8IZP7 471 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 BORCS6Q96GS4 357 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 ZSWIM3Q96MP5 696 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 REEP2Q9BRK0 252 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 RPF1Q9H9Y2 349 aaKnown RBP16.67■□□□□ 0.26
TRIM50-203ENST00000488217 LTB4R2Q9NPC1 389 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 CEP72Q9P209 647 aa16.67■□□□□ 0.26
TRIM50-203ENST00000488217 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
TRIM50-203ENST00000488217 XPOTO43592 962 aaKnown RBP16.66■□□□□ 0.26
TRIM50-203ENST00000488217 TRAK2O60296 914 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 FAM13AO94988 1023 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 CPB1P15086 417 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 DDIT3P35638 169 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 ZNF131P52739 623 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 FOXK2Q01167 660 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 ENOX2Q16206 610 aaKnown RBP16.66■□□□□ 0.26
TRIM50-203ENST00000488217 ZNF528Q3MIS6 628 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 DSTYKQ6XUX3 929 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 TMEM130Q8N3G9 435 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 LEMD2Q8NC56 503 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 CLDN23Q96B33 292 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 TRMT61BQ9BVS5 477 aaKnown RBP16.66■□□□□ 0.26
TRIM50-203ENST00000488217 UPF2Q9HAU5 1272 aaKnown RBP16.66■□□□□ 0.26
TRIM50-203ENST00000488217 PARVGQ9HBI0 331 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 BLOC1S4Q9NUP1 217 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 FBXO4Q9UKT5 387 aa16.66■□□□□ 0.26
TRIM50-203ENST00000488217 MRPS17Q9Y2R5 130 aaKnown RBP16.66■□□□□ 0.26
TRIM50-203ENST00000488217 MTCL1Q9Y4B5 1905 aaKnown RBP16.66■□□□□ 0.26
TRIM50-203ENST00000488217 A0A0B4J269 797 aa16.65■□□□□ 0.26
TRIM50-203ENST00000488217 HNRNPDLO14979 420 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms