RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PPP2R3AQ06190 1150 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 ZC2HC1CQ53FD0 456 aaPredicted RBP21.04■□□□□ 0.96
CD55-209ENST00000488171 PARM1Q6UWI2 310 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 FGF14Q92915 247 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 RPP25Q9BUL9 199 aaKnown RBP21.04■□□□□ 0.96
CD55-209ENST00000488171 FOXD4L1Q9NU39 408 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 STK17AQ9UEE5 414 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 UBQLN1Q9UMX0 589 aaKnown RBP21.04■□□□□ 0.96
CD55-209ENST00000488171 PCDHB8Q9UN66 801 aa21.04■□□□□ 0.96
CD55-209ENST00000488171 ANKRD63C9JTQ0 380 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 H0Y858 1186 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 PI15O43692 258 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 ATF2P15336 505 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 AOC1P19801 751 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 CYP3A5P20815 502 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 CTXN3Q4LDR2 81 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 PABPC1LQ4VXU2 614 aaKnown RBP21.03■□□□□ 0.96
CD55-209ENST00000488171 DYMQ7RTS9 669 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 KRI1Q8N9T8 703 aaKnown RBP21.03■□□□□ 0.96
CD55-209ENST00000488171 APPL2Q8NEU8 664 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 USP28Q96RU2 1077 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 MSTO1Q9BUK6 570 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 ST6GALNAC4Q9H4F1 302 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 RPF1Q9H9Y2 349 aaKnown RBP21.03■□□□□ 0.96
CD55-209ENST00000488171 FAM86C1Q9NVL1 165 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 CCDC39Q9UFE4 941 aa21.03■□□□□ 0.96
CD55-209ENST00000488171 CPSF3Q9UKF6 684 aaKnown RBP21.03■□□□□ 0.96
CD55-209ENST00000488171 MORC2Q9Y6X9 1032 aaPredicted RBP21.03■□□□□ 0.96
CD55-209ENST00000488171 TISP43B9A030 160 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 K7ELQ4 463 aaPredicted RBP21.02■□□□□ 0.96
CD55-209ENST00000488171 M0QZQ0 153 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 SEC24AO95486 1093 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 ABCD1P33897 745 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 AARSP49588 968 aaKnown RBP eCLIP21.02■□□□□ 0.964e-6■■■■□ 24
CD55-209ENST00000488171 GUCY2FP51841 1108 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 ZNF280DQ6N043 979 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 SFR1Q86XK3 245 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 TCEAL8Q8IYN2 117 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 GPR152Q8TDT2 470 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 KCNH3Q9ULD8 1083 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 CA14Q9ULX7 337 aa21.02■□□□□ 0.96
CD55-209ENST00000488171 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.02■□□□□ 0.96
CD55-209ENST00000488171 PRRG1O14668 218 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 RHOP08100 348 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 ELF1P32519 619 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 RRAGBQ5VZM2 374 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 TPGS2Q68CL5 300 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 NPAS3Q8IXF0 933 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 TSPAN18Q96SJ8 248 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 IRF2BPLQ9H1B7 796 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 SLC2A4RGQ9NR83 387 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 MYH15Q9Y2K3 1946 aa21.01■□□□□ 0.95
CD55-209ENST00000488171 MYMKA6NI61 221 aa21■□□□□ 0.95
CD55-209ENST00000488171 PPEF2O14830 753 aa21■□□□□ 0.95
CD55-209ENST00000488171 STX6O43752 255 aa21■□□□□ 0.95
CD55-209ENST00000488171 PPP1R37O75864 691 aa21■□□□□ 0.95
CD55-209ENST00000488171 LRG1P02750 347 aa21■□□□□ 0.95
CD55-209ENST00000488171 SLC39A14Q15043 492 aa21■□□□□ 0.95
CD55-209ENST00000488171 SLC5A9Q2M3M2 681 aa21■□□□□ 0.95
CD55-209ENST00000488171 SPATA1Q5VX52 437 aa21■□□□□ 0.95
CD55-209ENST00000488171 JADE1Q6IE81 842 aa21■□□□□ 0.95
CD55-209ENST00000488171 ZNF720Q7Z2F6 126 aa21■□□□□ 0.95
CD55-209ENST00000488171 ING5Q8WYH8 240 aa21■□□□□ 0.95
CD55-209ENST00000488171 ATOH1Q92858 354 aaPredicted RBP21■□□□□ 0.95
CD55-209ENST00000488171 DNAJC19Q96DA6 116 aa21■□□□□ 0.95
CD55-209ENST00000488171 STRA6Q9BX79 667 aa21■□□□□ 0.95
CD55-209ENST00000488171 IKZF4Q9H2S9 585 aa21■□□□□ 0.95
CD55-209ENST00000488171 CYP4F11Q9HBI6 524 aa21■□□□□ 0.95
CD55-209ENST00000488171 AVENQ9NQS1 362 aaPredicted RBP21■□□□□ 0.95
CD55-209ENST00000488171 TIMM13Q9Y5L4 95 aaPredicted RBP21■□□□□ 0.95
CD55-209ENST00000488171 INSL5Q9Y5Q6 135 aa21■□□□□ 0.95
CD55-209ENST00000488171 STYXL1Q9Y6J8 313 aa21■□□□□ 0.95
CD55-209ENST00000488171 PIEZO1Q92508 2521 aa21■□□□□ 0.95
CD55-209ENST00000488171 A0A087X0B3 334 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 XPOTO43592 962 aaKnown RBP20.99■□□□□ 0.95
CD55-209ENST00000488171 OAZ2O95190 189 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 PTPN2P17706 415 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 TXLNAP40222 546 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 ACOT2P49753 483 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 POTEHQ6S545 545 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 MTSS1LQ765P7 747 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 FAM212AQ96EL1 285 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 RTP3Q9BQQ7 232 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 ZSCAN16Q9H4T2 348 aaPredicted RBP20.99■□□□□ 0.95
CD55-209ENST00000488171 AFF4Q9UHB7 1163 aaKnown RBP20.99■□□□□ 0.95
CD55-209ENST00000488171 MRPS23Q9Y3D9 190 aaKnown RBP20.99■□□□□ 0.95
CD55-209ENST00000488171 ANK1P16157 1881 aa20.99■□□□□ 0.95
CD55-209ENST00000488171 NFICP08651 508 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 GPC5P78333 572 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 YWHAHQ04917 246 aaPredicted RBP20.98■□□□□ 0.95
CD55-209ENST00000488171 ADCY1Q08828 1119 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 ADALQ6DHV7 355 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 RNF19BQ6ZMZ0 732 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 SV2BQ7L1I2 683 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 CD302Q8IX05 232 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 HVCN1Q96D96 273 aa20.98■□□□□ 0.95
CD55-209ENST00000488171 CPB1P15086 417 aa20.97■□□□□ 0.95
CD55-209ENST00000488171 NASPP49321 788 aaPredicted RBP20.97■□□□□ 0.95
CD55-209ENST00000488171 KCNA1Q09470 495 aa20.97■□□□□ 0.95
CD55-209ENST00000488171 PRSS36Q5K4E3 855 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms