RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 NRG4Q8WWG1 115 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 DPF2Q92785 391 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 SEMA4GQ9NTN9 838 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 SLC17A6Q9P2U8 582 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 PRKAB1Q9Y478 270 aa5.43□□□□□ -1.54
CCDC66-221ENST00000487739 ZFPL1O95159 310 aa5.42□□□□□ -1.54
CCDC66-221ENST00000487739 WASP42768 502 aa5.42□□□□□ -1.54
CCDC66-221ENST00000487739 CLUL1Q15846 466 aa5.42□□□□□ -1.54
CCDC66-221ENST00000487739 SP5Q6BEB4 398 aaPredicted RBP5.42□□□□□ -1.54
CCDC66-221ENST00000487739 PPM1NQ8N819 430 aa5.42□□□□□ -1.54
CCDC66-221ENST00000487739 INTUQ9ULD6 942 aa5.42□□□□□ -1.54
CCDC66-221ENST00000487739 COL11A2P13942 1736 aaPredicted RBP5.41□□□□□ -1.54
CCDC66-221ENST00000487739 ORC4O43929 436 aa5.41□□□□□ -1.54
CCDC66-221ENST00000487739 MTHFD1P11586 935 aaKnown RBP5.41□□□□□ -1.54
CCDC66-221ENST00000487739 NHLH1Q02575 133 aa5.41□□□□□ -1.54
CCDC66-221ENST00000487739 SF3B3Q15393 1217 aaKnown RBP5.41□□□□□ -1.54
CCDC66-221ENST00000487739 LRCH2Q5VUJ6 765 aa5.41□□□□□ -1.54
CCDC66-221ENST00000487739 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.41□□□□□ -1.54
CCDC66-221ENST00000487739 RSPH3Q86UC2 560 aa5.41□□□□□ -1.54
CCDC66-221ENST00000487739 TMX3Q96JJ7 454 aa5.41□□□□□ -1.54
CCDC66-221ENST00000487739 TDP1Q9NUW8 608 aa5.41□□□□□ -1.54
CCDC66-221ENST00000487739 MCM8Q9UJA3 840 aa5.41□□□□□ -1.54
CCDC66-221ENST00000487739 A0A1W2PS29 197 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 MATN4O95460 622 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 FOLR3P41439 243 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 CDC42EP1Q00587 391 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 HNRNPA0Q13151 305 aaKnown RBP5.4□□□□□ -1.54
CCDC66-221ENST00000487739 CLNKQ7Z7G1 428 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 DCBLD1Q8N8Z6 715 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 Q8NA96 180 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 ZNF384Q8TF68 577 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 TMEM125Q96AQ2 219 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 PUS7LQ9H0K6 701 aaKnown RBP5.4□□□□□ -1.54
CCDC66-221ENST00000487739 KLK15Q9H2R5 256 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 FRMD4BQ9Y2L6 1034 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 NEU2Q9Y3R4 380 aa5.4□□□□□ -1.54
CCDC66-221ENST00000487739 POLR2AP24928 1970 aaKnown RBP5.4□□□□□ -1.55
CCDC66-221ENST00000487739 PHLDB1Q86UU1 1377 aa5.4□□□□□ -1.55
CCDC66-221ENST00000487739 PRAMEF33A0A0G2JMD5 474 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 GRM6O15303 877 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 YY2O15391 372 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 PRAMEF10O60809 474 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 PROP1O75360 226 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 C1QL1O75973 258 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 AGFG2O95081 481 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 SRGNP10124 158 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 KCNA2P16389 499 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 SLC16A1P53985 500 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 TARDBPQ13148 414 aaKnown RBP eCLIP5.39□□□□□ -1.55
CCDC66-221ENST00000487739 PABPC1LQ4VXU2 614 aaKnown RBP5.39□□□□□ -1.55
CCDC66-221ENST00000487739 GRASPQ7Z6J2 395 aaPredicted RBP5.39□□□□□ -1.55
CCDC66-221ENST00000487739 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 HDAC10Q969S8 669 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 FAM126AQ9BYI3 521 aaPredicted RBP5.39□□□□□ -1.55
CCDC66-221ENST00000487739 INTS13Q9NVM9 706 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 CDYLQ9Y232 598 aa5.39□□□□□ -1.55
CCDC66-221ENST00000487739 CCDC151A5D8V7 595 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 SGTAO43765 313 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 NDUFS2O75306 463 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 RBMXL2O75526 392 aaKnown RBP5.38□□□□□ -1.55
CCDC66-221ENST00000487739 POU3F3P20264 500 aaPredicted RBP5.38□□□□□ -1.55
CCDC66-221ENST00000487739 SLC6A4P31645 630 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 RPS7P62081 194 aaKnown RBP5.38□□□□□ -1.55
CCDC66-221ENST00000487739 ZNF844Q08AG5 666 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 NBPF8Q3BBV2 869 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 AKNAD1Q5T1N1 836 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 KIAA0895LQ68EN5 471 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 VWA1Q6PCB0 445 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 PGM2L1Q6PCE3 622 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 RAB24Q969Q5 203 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 UROC1Q96N76 676 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 TLR10Q9BXR5 811 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 PACSIN1Q9BY11 444 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 MKS1Q9NXB0 559 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 JKAMPQ9P055 326 aa5.38□□□□□ -1.55
CCDC66-221ENST00000487739 LRRC3CA6NJW4 275 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 INO80B-WBP1J3KQ70 363 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 MPPED1O15442 326 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 PROM1O43490 865 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 FPGSQ05932 587 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 PREPLQ4J6C6 727 aaPredicted RBP5.37□□□□□ -1.55
CCDC66-221ENST00000487739 UTP14CQ5TAP6 766 aaKnown RBP5.37□□□□□ -1.55
CCDC66-221ENST00000487739 IL17RDQ8NFM7 739 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 IFI44Q8TCB0 444 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 FBXL20Q96IG2 436 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 INO80BQ9C086 356 aaPredicted RBP5.37□□□□□ -1.55
CCDC66-221ENST00000487739 ASB6Q9NWX5 421 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 SLC5A4Q9NY91 659 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 TUBD1Q9UJT1 453 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 PCDHA13Q9Y5I0 950 aa5.37□□□□□ -1.55
CCDC66-221ENST00000487739 CD1AP06126 327 aa5.36□□□□□ -1.55
CCDC66-221ENST00000487739 SBK3P0C264 359 aa5.36□□□□□ -1.55
CCDC66-221ENST00000487739 IARSP41252 1262 aaKnown RBP5.36□□□□□ -1.55
CCDC66-221ENST00000487739 RAB39AQ14964 217 aa5.36□□□□□ -1.55
CCDC66-221ENST00000487739 ACAP2Q15057 778 aa5.36□□□□□ -1.55
CCDC66-221ENST00000487739 INAVAQ3KP66 663 aa5.36□□□□□ -1.55
CCDC66-221ENST00000487739 KAZNQ674X7 775 aa5.36□□□□□ -1.55
CCDC66-221ENST00000487739 ZNF365Q70YC5 407 aa5.36□□□□□ -1.55
CCDC66-221ENST00000487739 AOPEPQ8N6M6 819 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms