RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 H7C4K7 107 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 XPOTO43592 962 aaKnown RBP12.44□□□□□ -0.42
SPEN-205ENST00000487496 TBC1D4O60343 1298 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 HNRNPA1P09651 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPEN-205ENST00000487496 HOXA9P31269 272 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 ROR1Q01973 937 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 MTMR3Q13615 1198 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 POSTNQ15063 836 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 UVSSAQ2YD98 709 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
SPEN-205ENST00000487496 SPATA1Q5VX52 437 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 CRELD2Q6UXH1 353 aaPredicted RBP12.44□□□□□ -0.42
SPEN-205ENST00000487496 BMP8AQ7Z5Y6 402 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 CCDC65Q8IXS2 484 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 UBALD2Q8IYN6 164 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 IQUBQ8NA54 791 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 APPL2Q8NEU8 664 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 ZNF461Q8TAF7 563 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 POMGNT1Q8WZA1 660 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 ACCSQ96QU6 501 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 LRRC27Q9C0I9 530 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 ASB7Q9H672 318 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 PCDHA7Q9UN72 937 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 DENND4AQ7Z401 1863 aa12.44□□□□□ -0.42
SPEN-205ENST00000487496 MTCL1Q9Y4B5 1905 aaKnown RBP12.43□□□□□ -0.42
SPEN-205ENST00000487496 WDR27A2RRH5 827 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 M0QZQ0 153 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 PPEF2O14830 753 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 ABLIM3O94929 683 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 NFICP08651 508 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
SPEN-205ENST00000487496 ME1P48163 572 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 AARSP49588 968 aaKnown RBP eCLIP12.43□□□□□ -0.42
SPEN-205ENST00000487496 ARPP19P56211 112 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 AMPD3Q01432 767 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
SPEN-205ENST00000487496 ALCAMQ13740 583 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 CTXN3Q4LDR2 81 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 GRASPQ7Z6J2 395 aaPredicted RBP12.43□□□□□ -0.42
SPEN-205ENST00000487496 BEST2Q8NFU1 509 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 PBXIP1Q96AQ6 731 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 MFSD14AQ96MC6 490 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 MYADMQ96S97 322 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 TRIM9Q9C026 710 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 KCNK12Q9HB15 430 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 EPS15L1Q9UBC2 864 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 FBXL5Q9UKA1 691 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 RCOR1Q9UKL0 485 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 DERAQ9Y315 318 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 ARIH1Q9Y4X5 557 aaPredicted RBP12.43□□□□□ -0.42
SPEN-205ENST00000487496 MYH15Q9Y2K3 1946 aa12.43□□□□□ -0.42
SPEN-205ENST00000487496 MYO10Q9HD67 2058 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 CCL16O15467 120 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 POLR2DO15514 142 aaKnown RBP12.42□□□□□ -0.42
SPEN-205ENST00000487496 XYLBO75191 536 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 PRPF6O94906 941 aaKnown RBP12.42□□□□□ -0.42
SPEN-205ENST00000487496 OAZ2O95190 189 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 POU2F2P09086 479 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 NTHL1P78549 312 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 TMEM132DQ14C87 1099 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 C9orf57Q5W0N0 161 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 RESP18Q5W5W9 173 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 ZNF280DQ6N043 979 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 CNNM4Q6P4Q7 775 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 GET4Q7L5D6 327 aaPredicted RBP12.42□□□□□ -0.42
SPEN-205ENST00000487496 SYCP3Q8IZU3 236 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 HPS3Q969F9 1004 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 C7orf25Q9BPX7 421 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 TMEM206Q9H813 350 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 FAM13BQ9NYF5 915 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPEN-205ENST00000487496 IGSF9Q9P2J2 1179 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 POLIQ9UNA4 740 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
SPEN-205ENST00000487496 TIMM13Q9Y5L4 95 aaPredicted RBP12.42□□□□□ -0.42
SPEN-205ENST00000487496 PDCD11Q14690 1871 aaKnown RBP12.42□□□□□ -0.42
SPEN-205ENST00000487496 ANO9A1A5B4 782 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 PIRO00625 290 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 SPTLC1O15269 473 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 LAMP2P13473 410 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 ATF2P15336 505 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 GARTP22102 1010 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 FSHRP23945 695 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 ELF1P32519 619 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 LILRA4P59901 499 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 ASIC1P78348 528 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 YWHAHQ04917 246 aaPredicted RBP12.41□□□□□ -0.42
SPEN-205ENST00000487496 TDGQ13569 410 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 TPGS2Q68CL5 300 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 DSTYKQ6XUX3 929 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 ZSWIM2Q8NEG5 633 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms