RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
CLIP2-207ENST00000487447 CYP2J2P51589 502 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 LRRC63Q05C16 580 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
CLIP2-207ENST00000487447 USP41Q3LFD5 358 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 TMEM184AQ6ZMB5 413 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 RBM43Q6ZSC3 357 aaKnown RBP12.62□□□□□ -0.39
CLIP2-207ENST00000487447 C1orf127Q8N9H9 656 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 PLEKHO2Q8TD55 490 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 HASPINQ8TF76 798 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 DHTKD1Q96HY7 919 aaPredicted RBP12.62□□□□□ -0.39
CLIP2-207ENST00000487447 SUSD3Q96L08 255 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 CGRRF1Q99675 332 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 FNIP2Q9P278 1114 aa12.62□□□□□ -0.39
CLIP2-207ENST00000487447 MUC3AQ02505 3323 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 MTCL1Q9Y4B5 1905 aaKnown RBP12.61□□□□□ -0.39
CLIP2-207ENST00000487447 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 PPEF2O14830 753 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 SYN3O14994 580 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 EXOC3O60645 756 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 CXCL14O95715 111 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 GLP2RO95838 553 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 MBD3O95983 291 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 NR2F2P24468 414 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 CCNE1P24864 410 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 LTBRP36941 435 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 BRCC3P46736 316 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 CASP4P49662 377 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 CREMQ03060 361 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 ADAM15Q13444 863 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 MRPL58Q14197 206 aaKnown RBP12.61□□□□□ -0.39
CLIP2-207ENST00000487447 TMEM130Q8N3G9 435 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 LRRC52Q8N7C0 313 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 LNX1Q8TBB1 728 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-207ENST00000487447 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 HLA-CQ95604 372 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 KLHL5Q96PQ7 755 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 TTPALQ9BTX7 342 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 MKNK1Q9BUB5 465 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 NUP62CLQ9H1M0 184 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 EPHX3Q9H6B9 360 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLIP2-207ENST00000487447 MRPL17Q9NRX2 175 aaKnown RBP12.61□□□□□ -0.39
CLIP2-207ENST00000487447 DPP3Q9NY33 737 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 ITGA11Q9UKX5 1188 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 COG5Q9UP83 839 aa12.61□□□□□ -0.39
CLIP2-207ENST00000487447 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 PSMA7O14818 248 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 TBC1D4O60343 1298 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 AKAP3O75969 853 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 PAPLNO95428 1278 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 CNPP09543 421 aaKnown RBP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 RPL13P26373 211 aaKnown RBP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 GTF2F1P35269 517 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 NRIP1P48552 1158 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 LILRA4P59901 499 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 CAMK4Q16566 473 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 FAM171A1Q5VUB5 890 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 PDXDC1Q6P996 788 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 TMC2Q8TDI7 906 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 MICAL1Q8TDZ2 1067 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 SLC22A17Q8WUG5 538 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 CACTINQ8WUQ7 758 aaKnown RBP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 AUTS2Q8WXX7 1259 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 TLE6Q9H808 572 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 UBE2ZQ9H832 354 aaPredicted RBP12.6□□□□□ -0.39
CLIP2-207ENST00000487447 MTRRQ9UBK8 725 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 SIX4Q9UIU6 781 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 PCDHB8Q9UN66 801 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 BACE2Q9Y5Z0 518 aa12.6□□□□□ -0.39
CLIP2-207ENST00000487447 DENND4AQ7Z401 1863 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 SPTLC1O15269 473 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 TBX10O75333 385 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
CLIP2-207ENST00000487447 ITGB3P05106 788 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 CYP11A1P05108 521 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 TKTP29401 623 aaKnown RBP12.59□□□□□ -0.39
CLIP2-207ENST00000487447 MCM4P33991 863 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 PNPLA4P41247 253 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 NDUFV1P49821 464 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 AP3M2P53677 418 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 TFAMQ00059 246 aaKnown RBP12.59□□□□□ -0.39
CLIP2-207ENST00000487447 STIM1Q13586 685 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 DUOXA2Q1HG44 320 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 C1orf220Q5T0J3 134 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 ANKRD40Q6AI12 368 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 TTI2Q6NXR4 508 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 C15orf39Q6ZRI6 1047 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
CLIP2-207ENST00000487447 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms