RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 KCNA1Q09470 495 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
RNF220-215ENST00000487332 LIN9Q5TKA1 542 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 JADE1Q6IE81 842 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 CEP57Q86XR8 500 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 RNF135Q8IUD6 432 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 C12orf56Q8IXR9 622 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 SYCP3Q8IZU3 236 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 TDRD5Q8NAT2 981 aaKnown RBP11.14□□□□□ -0.63
RNF220-215ENST00000487332 STAMQ92783 540 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 KHSRPQ92945 711 aaKnown RBP eCLIP11.14□□□□□ -0.63
RNF220-215ENST00000487332 ZNF707Q96C28 371 aaPredicted RBP11.14□□□□□ -0.63
RNF220-215ENST00000487332 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 KIAA1586Q9HCI6 787 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 WDR6Q9NNW5 1121 aaKnown RBP11.14□□□□□ -0.63
RNF220-215ENST00000487332 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 CITO14578 2027 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 MYO9BQ13459 2157 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 TSC2P49815 1807 aa11.14□□□□□ -0.63
RNF220-215ENST00000487332 VWA8A3KMH1 1905 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 CLUHO75153 1309 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 PIRO00625 290 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 OAZ2O95190 189 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 CYP11A1P05108 521 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 NFICP08651 508 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 ACOT2P49753 483 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 PSMD2Q13200 908 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 C9orf57Q5W0N0 161 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 TPGS2Q68CL5 300 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 ARMCX5Q6P1M9 558 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 TMC5Q6UXY8 1006 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 OTOP3Q7RTS5 596 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 GPD1LQ8N335 351 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 C12orf76Q8N812 135 aaPredicted RBP11.13□□□□□ -0.63
RNF220-215ENST00000487332 ZNF560Q96MR9 790 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 APOL5Q9BWW9 433 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 RBAKQ9NYW8 714 aaPredicted RBP11.13□□□□□ -0.63
RNF220-215ENST00000487332 CDY1Q9Y6F8 540 aa11.13□□□□□ -0.63
RNF220-215ENST00000487332 TCF20Q9UGU0 1960 aaKnown RBP11.13□□□□□ -0.63
RNF220-215ENST00000487332 CCDC195A0A1B0GUA6 201 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 PRR33A8MZF0 331 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 C2CD4DB7Z1M9 353 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 I3L4J1 428 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 ADAM12O43184 909 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 KLRC4O43908 158 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 PRPF6O94906 941 aaKnown RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 ABLIM3O94929 683 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 C8AP07357 584 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 ODC1P11926 461 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 RPL17P18621 184 aaKnown RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 IGFBP6P24592 240 aaPredicted RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 HOXD13P35453 343 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 PNPLA4P41247 253 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 SYKP43405 635 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 ROR1Q01973 937 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 YWHAHQ04917 246 aaPredicted RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 CUL4BQ13620 913 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 MYBPC2Q14324 1141 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 SURF1Q15526 300 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 PTPN21Q16825 1174 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 TMEM31Q5JXX7 168 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 RSPO2Q6UXX9 243 aaPredicted RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 PALB2Q86YC2 1186 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 EFCAB13Q8IY85 973 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 ZNF461Q8TAF7 563 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 GOLGA5Q8TBA6 731 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 ACSF2Q96CM8 615 aaPredicted RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 PAGE5Q96GU1 130 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 RPGRIP1Q96KN7 1286 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 CBWD1Q9BRT8 395 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 FAM213AQ9BRX8 229 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 EPHX3Q9H6B9 360 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 C11orf16Q9NQ32 467 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 AVENQ9NQS1 362 aaPredicted RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 SERTAD1Q9UHV2 236 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 DSEQ9UL01 958 aa11.12□□□□□ -0.63
RNF220-215ENST00000487332 ZFP37Q9Y6Q3 630 aaPredicted RBP11.12□□□□□ -0.63
RNF220-215ENST00000487332 A0A1B0GVL5 298 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 WDR27A2RRH5 827 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 OR6C75A6NL08 312 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 TGFB1I1O43294 461 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 XYLBO75191 536 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 RFPL2O75678 378 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 ATF2P15336 505 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 OR1D2P34982 312 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 TAF6P49848 677 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 LILRA4P59901 499 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 SPAG1Q07617 926 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 CTXN3Q4LDR2 81 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 PPM1LQ5SGD2 360 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 HS2ST1Q7LGA3 356 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 BMP8AQ7Z5Y6 402 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 GLYCTKQ8IVS8 523 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 TCEAL8Q8IYN2 117 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 UBALD2Q8IYN6 164 aa11.11□□□□□ -0.63
RNF220-215ENST00000487332 LRRC52Q8N7C0 313 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms