RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 A0A0A6YYK5 440 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 RCCD1A6NED2 376 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 DDX3XO00571 662 aaKnown RBP eCLIP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 CYP26A1O43174 497 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 XPOTO43592 962 aaKnown RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 SGPL1O95470 568 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 ABL1P00519 1130 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 ASS1P00966 412 aaKnown RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 GZMAP12544 262 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 P4HA1P13674 534 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 FGFR4P22455 802 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 GTF2F1P35269 517 aaKnown RBP eCLIP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 MRPS6P82932 125 aaKnown RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 ZNF200P98182 395 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 CDR2Q01850 454 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 TMEM132DQ14C87 1099 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 KCNA10Q16322 511 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 ZNF699Q32M78 642 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 PPP1R2P3Q6NXS1 205 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 RPAINQ86UA6 219 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 GLYCTKQ8IVS8 523 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 RPUSD2Q8IZ73 545 aaKnown RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 MNS1Q8NEH6 495 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 SLC30A5Q8TAD4 765 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 EPS8L1Q8TE68 723 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 PPP1R13LQ8WUF5 828 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 CTNNBL1Q8WYA6 563 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 KAT5Q92993 513 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 TSPAN18Q96SJ8 248 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 TSEN34Q9BSV6 310 aaKnown RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 SYT11Q9BT88 431 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 L2HGDHQ9H9P8 463 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 HMX1Q9NP08 348 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 TRIM10Q9UDY6 481 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 TSKSQ9UJT2 592 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 PIN4Q9Y237 131 aaKnown RBP7.56□□□□□ -1.2
SF3A3-206ENST00000487062 DERAQ9Y315 318 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 C2CD2Q9Y426 696 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 JRKLQ9Y4A0 524 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 PCDHB4Q9Y5E5 795 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 PCDHB2Q9Y5E7 798 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 PCDHGA10Q9Y5H3 936 aa7.56□□□□□ -1.2
SF3A3-206ENST00000487062 ANKRD62A6NC57 917 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 MOXD2PA6NHM9 499 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 RTN2O75298 545 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 MOCS3O95396 460 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 SLC34A2O95436 690 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 CST3P01034 146 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 INHAP05111 366 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 KRT19P08727 400 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 TMEM253P0C7T8 217 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 CYP11B1P15538 503 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 HOXA11P31270 313 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 ATICP31939 592 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 GRK4P32298 578 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 NOP2P46087 812 aaKnown RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 ATN1P54259 1190 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 GALCP54803 685 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 MYL6P60660 151 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 ITGA7Q13683 1181 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 SLC10A6Q3KNW5 377 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 ZNF667Q5HYK9 610 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 JADE1Q6IE81 842 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 SPOPLQ6IQ16 392 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 CCSAPQ6IQ19 270 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 GDF6Q6KF10 455 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 TRIM72Q6ZMU5 477 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 NOP9Q86U38 636 aaKnown RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 SERINC5Q86VE9 423 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 EFCAB13Q8IY85 973 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 TMEM192Q8IY95 271 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 HACE1Q8IYU2 909 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 SYCE1Q8N0S2 351 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 TTC39CQ8N584 583 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 CEP112Q8N8E3 955 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 TTC13Q8NBP0 860 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 ARRDC4Q8NCT1 418 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 LNX1Q8TBB1 728 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 ZNF296Q8WUU4 475 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 GLMNQ92990 594 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 GLT1D1Q96MS3 346 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 PDCL3Q9H2J4 239 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 SNTG2Q9NY99 539 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 CDC23Q9UJX2 597 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 NOCTQ9UK39 431 aaKnown RBP7.55□□□□□ -1.2
SF3A3-206ENST00000487062 ITGA11Q9UKX5 1188 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 NENFQ9UMX5 172 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 TFR2Q9UP52 801 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 NOD1Q9Y239 953 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 NUB1Q9Y5A7 615 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 CDY2AQ9Y6F7 541 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 DUSP10Q9Y6W6 482 aa7.55□□□□□ -1.2
SF3A3-206ENST00000487062 POM121CA8CG34 1229 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 TMCO5BA8MYB1 307 aa7.54□□□□□ -1.2
SF3A3-206ENST00000487062 DYNC1I1O14576 645 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms