RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 THNSL1Q8IYQ7 743 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 IFT81Q8WYA0 676 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 KRT35Q92764 455 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 ZNF668Q96K58 619 aaPredicted RBP21.75■■□□□ 1.07
HPS3-206ENST00000486530 C16orf70Q9BSU1 422 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 CDT1Q9H211 546 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 MINDY3Q9H8M7 445 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 IFT122Q9HBG6 1241 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 NFU1Q9UMS0 254 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 ESYT3A0FGR9 886 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 IL18RAPO95256 599 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 CST3P01034 146 aaPredicted RBP21.75■■□□□ 1.07
HPS3-206ENST00000486530 TNNC2P02585 160 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 TMOD1P28289 359 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 CTNNA1P35221 906 aaKnown RBP21.75■■□□□ 1.07
HPS3-206ENST00000486530 PEX5P50542 639 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 ZNF132P52740 706 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 TRPC3Q13507 836 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 CUL1Q13616 776 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 TAF1CQ15572 869 aaPredicted RBP21.75■■□□□ 1.07
HPS3-206ENST00000486530 DUSP28Q4G0W2 176 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 MORN1Q5T089 497 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 EEF1DP3Q658K8 133 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 IFNL1Q8IU54 200 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 ANKRD36BP1Q96IX9 119 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 NIF3L1Q9GZT8 377 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 ABHD16BQ9H3Z7 469 aa21.75■■□□□ 1.07
HPS3-206ENST00000486530 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.74■■□□□ 1.07
HPS3-206ENST00000486530 FAM155AB1AL88 458 aaPredicted RBP21.74■■□□□ 1.07
HPS3-206ENST00000486530 BHMG1C9JSJ3 638 aaPredicted RBP21.74■■□□□ 1.07
HPS3-206ENST00000486530 HOXD8P13378 290 aaPredicted RBP21.74■■□□□ 1.07
HPS3-206ENST00000486530 ZNF211Q13398 564 aaPredicted RBP21.74■■□□□ 1.07
HPS3-206ENST00000486530 SEL1L2Q5TEA6 688 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 MON1BQ7L1V2 547 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 WHAMMQ8TF30 809 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 CPA5Q8WXQ8 436 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 TINF2Q9BSI4 451 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 PLEKHA4Q9H4M7 779 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 AKT3Q9Y243 479 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 TLL2Q9Y6L7 1015 aa21.74■■□□□ 1.07
HPS3-206ENST00000486530 MARCKSL1P49006 195 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 INHBEP58166 350 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 MYL6P60660 151 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 NOMO3P69849 1222 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 TFAMQ00059 246 aaKnown RBP21.73■■□□□ 1.07
HPS3-206ENST00000486530 TNFAIP2Q03169 654 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 C17orf99Q6UX52 265 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 EFCAB13Q8IY85 973 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 SMC1BQ8NDV3 1235 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 CYFIP2Q96F07 1278 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 VCPIP1Q96JH7 1222 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 BTBD6Q96KE9 485 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 RPF1Q9H9Y2 349 aaKnown RBP21.73■■□□□ 1.07
HPS3-206ENST00000486530 PCDHA3Q9Y5H8 950 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 GOLGA6BA6NDN3 693 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 H3BRB1 525 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 THAP12O43422 761 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 IQCF3P0C7M6 154 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 DMTNQ08495 405 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 LIN9Q5TKA1 542 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 MTHFD1LQ6UB35 978 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 TUT1Q9H6E5 874 aaKnown RBP21.73■■□□□ 1.07
HPS3-206ENST00000486530 SLC5A4Q9NY91 659 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 AMACRQ9UHK6 382 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 ANAPC7Q9UJX3 599 aa21.73■■□□□ 1.07
HPS3-206ENST00000486530 A0A087WZ62 844 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 ZEB2O60315 1214 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 MMP3P08254 477 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 MCF2P10911 925 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 SMPD1P17405 629 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 RRM1P23921 792 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 POU5F1Q01860 360 aaKnown RBP21.72■■□□□ 1.07
HPS3-206ENST00000486530 ACVR2BQ13705 512 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 AMHR2Q16671 573 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 PHF13Q86YI8 300 aaPredicted RBP21.72■■□□□ 1.07
HPS3-206ENST00000486530 MREGQ8N565 214 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 CEP120Q8N960 986 aa21.72■■□□□ 1.07
HPS3-206ENST00000486530 FDXACB1Q9BRP7 624 aaPredicted RBP21.72■■□□□ 1.07
HPS3-206ENST00000486530 SYF2O95926 243 aaKnown RBP21.71■■□□□ 1.07
HPS3-206ENST00000486530 OSTNP61366 133 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 ZNF699Q32M78 642 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 IQSEC1Q6DN90 963 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 OR6J1Q8NGC5 347 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.71■■□□□ 1.07
HPS3-206ENST00000486530 VPS18Q9P253 973 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 ZHX1Q9UKY1 873 aaPredicted RBP21.71■■□□□ 1.07
HPS3-206ENST00000486530 MROH7Q68CQ1 1323 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 CXCL8P10145 99 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 SLC1A1P43005 524 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 RWDD2BP57060 319 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 PPFIA1Q13136 1202 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 DGKDQ16760 1214 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 KYAT1Q16773 422 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 ALS2CLQ60I27 953 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 SCARA3Q6AZY7 606 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 CDR2LQ86X02 465 aaPredicted RBP21.71■■□□□ 1.07
HPS3-206ENST00000486530 FAN1Q9Y2M0 1017 aa21.71■■□□□ 1.07
HPS3-206ENST00000486530 GPR25O00155 361 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 GGCXP38435 758 aa21.7■■□□□ 1.06
HPS3-206ENST00000486530 YWHAEP62258 255 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms