RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 LAMTOR5O43504 91 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 NPTXRO95502 500 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 CD72P21854 359 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 CREMQ03060 361 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 HSP90AA2PQ14568 343 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-226ENST00000486210 VARS2Q5ST30 1063 aaKnown RBP19.24■□□□□ 0.67
MCF2L-226ENST00000486210 LNX1Q8TBB1 728 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-226ENST00000486210 PRIMPOLQ96LW4 560 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 TIGD1Q96MW7 591 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 TIPINQ9BVW5 301 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 BCO2Q9BYV7 579 aa19.24■□□□□ 0.67
MCF2L-226ENST00000486210 ZMYM2Q9UBW7 1377 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 SPTLC1O15269 473 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 ADAM12O43184 909 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 TADA2AO75478 443 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 KRT37O76014 449 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 C8AP07357 584 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 HNRNPA1P09651 372 aaKnown RBP eCLIP19.23■□□□□ 0.67
MCF2L-226ENST00000486210 AMPD3Q01432 767 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 PRKCQQ04759 706 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 CSTF1Q05048 431 aaKnown RBP19.23■□□□□ 0.67
MCF2L-226ENST00000486210 UBXN2BQ14CS0 331 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 PIK3R5Q8WYR1 880 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 KIFAP3Q92845 792 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 OSBPL6Q9BZF3 934 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 CXCL16Q9H2A7 254 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 LTB4R2Q9NPC1 389 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 ODF2LQ9ULJ1 636 aa19.23■□□□□ 0.67
MCF2L-226ENST00000486210 SF3B1O75533 1304 aaKnown RBP eCLIP19.23■□□□□ 0.67
MCF2L-226ENST00000486210 CACNA1BQ00975 2339 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 A0A1B0GUA9 196 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 FAM170BA6NMN3 283 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 CCL16O15467 120 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 KIF4AO95239 1232 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 HOXA9P31269 272 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 ZNF131P52739 623 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 PEX3P56589 373 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 PPM1LQ5SGD2 360 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 CNNM4Q6P4Q7 775 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 MTSS1LQ765P7 747 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 ZBTB44Q8NCP5 570 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 NELL1Q92832 810 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 ERCC4Q92889 916 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-226ENST00000486210 DRC1Q96MC2 740 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 KXD1Q9BQD3 176 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 ADPGKQ9BRR6 497 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 TTPALQ9BTX7 342 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 KIFC3Q9BVG8 833 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 LRRC27Q9C0I9 530 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 ZHX3Q9H4I2 956 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 HCFC1R1Q9NWW0 138 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 NCDNQ9UBB6 729 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 PCDHGA2Q9Y5H1 932 aa19.22■□□□□ 0.67
MCF2L-226ENST00000486210 CASTOR2A6NHX0 329 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 SHISA7A6NL88 538 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 PTGESO14684 152 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 N4BP3O15049 544 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 KLRC4O43908 158 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 LILRB5O75023 590 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 FAM13AO94988 1023 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 PLS3P13797 630 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 IDEP14735 1019 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 ATXN1P54253 815 aaKnown RBP19.21■□□□□ 0.67
MCF2L-226ENST00000486210 ASIC1P78348 528 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 DPYDQ12882 1025 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 TUSC3Q13454 348 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 PNOCQ13519 176 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 PPP2R5AQ15172 486 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 NAB2Q15742 525 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 PSMD5Q16401 504 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 MAPK6Q16659 721 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 LIN9Q5TKA1 542 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 FAM171A1Q5VUB5 890 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 POTEHQ6S545 545 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 CEP57Q86XR8 500 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 DEPTORQ8TB45 409 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 BORCS6Q96GS4 357 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 POLIQ9UNA4 740 aa19.21■□□□□ 0.67
MCF2L-226ENST00000486210 FRMD3A2A2Y4 597 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 TBCAO75347 108 aaKnown RBP19.2■□□□□ 0.66
MCF2L-226ENST00000486210 TARSP26639 723 aaKnown RBP19.2■□□□□ 0.66
MCF2L-226ENST00000486210 NPTX2P47972 431 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 FZD5Q13467 585 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 POSTNQ15063 836 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 TSSK4Q6SA08 328 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 RSPO2Q6UXX9 243 aaPredicted RBP19.2■□□□□ 0.66
MCF2L-226ENST00000486210 SFR1Q86XK3 245 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 NPAS3Q8IXF0 933 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 MYCT1Q8N699 235 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 SLC7A14Q8TBB6 771 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 HPS3Q969F9 1004 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 CLDN23Q96B33 292 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 IFT74Q96LB3 600 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 FIZ1Q96SL8 496 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 EPC1Q9H2F5 836 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 PARVGQ9HBI0 331 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 PANK4Q9NVE7 773 aa19.2■□□□□ 0.66
MCF2L-226ENST00000486210 DNMT3BQ9UBC3 853 aaKnown RBP19.2■□□□□ 0.66
MCF2L-226ENST00000486210 KMT2BQ9UMN6 2715 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms