RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RNPC3Q96LT9 517 aaKnown RBP6.13□□□□□ -1.43
COPS3-208ENST00000486032 CCDC94Q9BW85 323 aaPredicted RBP6.13□□□□□ -1.43
COPS3-208ENST00000486032 STRA6Q9BX79 667 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 FTHL17Q9BXU8 183 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 GTPBP4Q9BZE4 634 aaKnown RBP6.13□□□□□ -1.43
COPS3-208ENST00000486032 HAPLN2Q9GZV7 340 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 MTIF3Q9H2K0 278 aaKnown RBP6.13□□□□□ -1.43
COPS3-208ENST00000486032 KCTD10Q9H3F6 313 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 NXF3Q9H4D5 531 aaKnown RBP6.13□□□□□ -1.43
COPS3-208ENST00000486032 CHST12Q9NRB3 414 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 AGPAT3Q9NRZ7 376 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 RGS18Q9NS28 235 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 TYW1Q9NV66 732 aaKnown RBP6.13□□□□□ -1.43
COPS3-208ENST00000486032 ANO10Q9NW15 660 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 HSPBP1Q9NZL4 362 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 AGO2Q9UKV8 859 aaKnown RBP6.13□□□□□ -1.43
COPS3-208ENST00000486032 IPPQ9Y573 584 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 PCDHB7Q9Y5E2 793 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 PCDHB2Q9Y5E7 798 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 UBE4BO95155 1302 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 ZMYM2Q9UBW7 1377 aa6.13□□□□□ -1.43
COPS3-208ENST00000486032 CHD9Q3L8U1 2897 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 EYSQ5T1H1 3165 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 A0A1B0GUA9 196 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 ABHD14A-ACY1A0A1B0GW23 586 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 BICDL2A1A5D9 508 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 TBKBP1A7MCY6 615 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 C9IYK1 514 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 PDXKO00764 312 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 CETN3O15182 167 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 OGTO15294 1046 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 CLSTN1O94985 981 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 POMCP01189 267 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 PIGRP01833 764 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 NR3C1P04150 777 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 STAG3L1P0CL83 205 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 CXCL8P10145 99 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 MCF2P10911 925 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 SKIP12755 728 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 GARTP22102 1010 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 SCP2P22307 547 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 NR2F2P24468 414 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 ADSSP30520 456 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 PPP1R2P41236 205 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 CASP4P49662 377 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 RABGGTBP53611 331 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 YARSP54577 528 aaKnown RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 WDR5P61964 334 aaKnown RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 MCL1Q07820 350 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 ADAM9Q13443 819 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 PCBP1Q15365 356 aaKnown RBP eCLIP6.12□□□□□ -1.43
COPS3-208ENST00000486032 BMT2Q1RMZ1 405 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 CCDC40Q4G0X9 1142 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 GLRA4Q5JXX5 417 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 LMBRD2Q68DH5 695 aaPredicted RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 SLCO4C1Q6ZQN7 724 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 RBM43Q6ZSC3 357 aaKnown RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 CBWD2Q8IUF1 395 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 ABI1Q8IZP0 508 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 GPD1LQ8N335 351 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 KDF1Q8NAX2 398 aaPredicted RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 XXYLT1Q8NBI6 393 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 SMG8Q8ND04 991 aaKnown RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 HELQQ8TDG4 1101 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 PGBD4Q96DM1 585 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 CCDC51Q96ER9 411 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 DHTKD1Q96HY7 919 aaPredicted RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 FAM161BQ96MY7 647 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 ACAP3Q96P50 834 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 RPS6KC1Q96S38 1066 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 SRRTQ9BXP5 876 aaKnown RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 MMRN2Q9H8L6 949 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 RPF1Q9H9Y2 349 aaKnown RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 RSAD1Q9HA92 442 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 C1orf112Q9NSG2 853 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 YBX2Q9Y2T7 364 aaKnown RBP6.12□□□□□ -1.43
COPS3-208ENST00000486032 SLC4A7Q9Y6M7 1214 aa6.12□□□□□ -1.43
COPS3-208ENST00000486032 ARID1BQ8NFD5 2236 aaPredicted RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 MICAL3Q7RTP6 2002 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 A0A0B4J269 797 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 A0A0U1RQF3 1178 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 ZNF233A6NK53 670 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 BECN2A8MW95 431 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 LACTBL1A8MY62 500 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 ABLIM1O14639 778 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 EXTL3O43909 919 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 EFCAB14O75071 495 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 RECQL4O94761 1208 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 BAIAP3O94812 1187 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 CSPG5O95196 566 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 LDHAP00338 332 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 DLATP10515 647 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 EPB41P11171 864 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 ATP2A2P16615 1042 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 ATF7P17544 494 aaPredicted RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 PROZP22891 400 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 RPL13P26373 211 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 BMP8BP34820 402 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 MLH1P40692 756 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms