RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TSC2P49815 1807 aa12.2□□□□□ -0.46
SND1-212ENST00000485871 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 AKR1B15C9JRZ8 316 aaPredicted RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 ARHGAP6O43182 974 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 EOMESO95936 686 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 ASS1P00966 412 aaKnown RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 TNNC2P02585 160 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 TMEM191BP0C7N4 346 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 TRIM21P19474 475 aaKnown RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 MLH1P40692 756 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 GUCY2FP51841 1108 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 ADKP55263 362 aaKnown RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 JAM2P57087 298 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 POLR2FP61218 127 aaKnown RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 NCOA4Q13772 614 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 GLRA4Q5JXX5 417 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 MFSD5Q6N075 450 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 CNKSR3Q6P9H4 555 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 TMEM139Q8IV31 216 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 HACE1Q8IYU2 909 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 CCAR2Q8N163 923 aaKnown RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 TATDN2Q93075 761 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 ANKRD36BP1Q96IX9 119 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 PCMTD1Q96MG8 357 aaPredicted RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 KREMEN1Q96MU8 473 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 GAD1Q99259 594 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 DNAJC7Q99615 494 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 PI4K2AQ9BTU6 479 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 RSAD1Q9HA92 442 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 DPP3Q9NY33 737 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 TUBGCP4Q9UGJ1 667 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 UBQLN1Q9UMX0 589 aaKnown RBP12.19□□□□□ -0.46
SND1-212ENST00000485871 DAAM1Q9Y4D1 1078 aa12.19□□□□□ -0.46
SND1-212ENST00000485871 ARL5CA6NH57 179 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 DYNC1I1O14576 645 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 ZSCAN12O43309 604 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 STAU1O95793 577 aaKnown RBP12.18□□□□□ -0.46
SND1-212ENST00000485871 ITGB3P05106 788 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 CYP3A5P20815 502 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 RFX1P22670 979 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 HNRNPH3P31942 346 aaKnown RBP12.18□□□□□ -0.46
SND1-212ENST00000485871 KRT9P35527 623 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 MYL6P60660 151 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 ZBED6P86452 979 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 CETN1Q12798 172 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 BIRC3Q13489 604 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 FAM109BQ6ICB4 259 aaPredicted RBP12.18□□□□□ -0.46
SND1-212ENST00000485871 SPOPLQ6IQ16 392 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 PDXDC1Q6P996 788 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 CNGA4Q8IV77 575 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 MYRIPQ8NFW9 859 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 KAT5Q92993 513 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
SND1-212ENST00000485871 PGBD4Q96DM1 585 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 GUCD1Q96NT3 240 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 NLRC4Q9NPP4 1024 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 PRDM5Q9NQX1 630 aaPredicted RBP12.18□□□□□ -0.46
SND1-212ENST00000485871 ABHD10Q9NUJ1 306 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 TMEM161AQ9NX61 479 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 DNAJC12Q9UKB3 198 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 ITGA11Q9UKX5 1188 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 LUC7L2Q9Y383 392 aaKnown RBP12.18□□□□□ -0.46
SND1-212ENST00000485871 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 KIAA1671Q9BY89 1806 aa12.18□□□□□ -0.46
SND1-212ENST00000485871 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 PPEF2O14830 753 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 TNNT1P13805 278 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 CSF2RAP15509 400 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 RAG1P15918 1043 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 LRPAP1P30533 357 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.46
SND1-212ENST00000485871 NOP14P78316 857 aaKnown RBP12.17□□□□□ -0.46
SND1-212ENST00000485871 GCNT1Q02742 428 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 MEA1Q16626 185 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 WDR59Q6PJI9 974 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 UBR7Q8N806 425 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 BEST2Q8NFU1 509 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 NT5C1BQ96P26 610 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 STK33Q9BYT3 514 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 UBN1Q9NPG3 1134 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 MYO6Q9UM54 1294 aa12.17□□□□□ -0.46
SND1-212ENST00000485871 F8VZ95 297 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 PIRO00625 290 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 PHACTR2O75167 634 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 POLR2BP30876 1174 aaKnown RBP12.16□□□□□ -0.46
SND1-212ENST00000485871 SCNN1GP51170 649 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 DRAP1Q14919 205 aaPredicted RBP12.16□□□□□ -0.46
SND1-212ENST00000485871 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 C9orf57Q5W0N0 161 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms