RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TAS1R3	Q7RTX0	852 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	FGF13	Q92913	245 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	TMX3	Q96JJ7	454 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	ACO2	Q99798	780 aa	Known RBP	11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	TCHP	Q9BT92	498 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	MMTAG2	Q9BU76	263 aa	Known RBP	11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	TARS2	Q9BW92	718 aa	Known RBP	11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	CDT1	Q9H211	546 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	KMT5A	Q9NQR1	393 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	POLI	Q9UNA4	740 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	TNFSF13B	Q9Y275	285 aa		11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.6	□□□□□ -0.55
HMGN1-215	ENST00000485550	ZMYM2	Q9UBW7	1377 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	SMIM28	A0A1B0GU29	152 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550		H3BQV1	296 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	LAD1	O00515	517 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	SLC30A4	O14863	429 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	SLC16A4	O15374	487 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	CCL16	O15467	120 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	GJB2	P29033	226 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	OR1D2	P34982	312 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	MAGEA9	P43362	315 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	BRCC3	P46736	316 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	CREM	Q03060	361 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	MAPK7	Q13164	816 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	ZNF568	Q3ZCX4	644 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	PRR23B	Q6ZRT6	265 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	C1orf186	Q6ZWK4	172 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	GPR65	Q8IYL9	337 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	ITFG1	Q8TB96	612 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	NETO1	Q8TDF5	533 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	PIK3R5	Q8WYR1	880 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	CLDN23	Q96B33	292 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	ZBTB45	Q96K62	511 aa	Predicted RBP	11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	PPP1R10	Q96QC0	940 aa	Known RBP	11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	CCDC94	Q9BW85	323 aa	Predicted RBP	11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	MFRP	Q9BY79	579 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	PRMT8	Q9NR22	394 aa	Predicted RBP	11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	HEBP1	Q9NRV9	189 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	RAB23	Q9ULC3	237 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	KIF3A	Q9Y496	699 aa		11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.59	□□□□□ -0.55
HMGN1-215	ENST00000485550	COL4A2	P08572	1712 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	VWA3A	A6NCI4	1184 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	NCAM2	O15394	837 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	C8A	P07357	584 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	TKT	P29401	623 aa	Known RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	PRPH	P41219	470 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	GRM5	P41594	1212 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	YARS	P54577	528 aa	Known RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	PFKP	Q01813	784 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	SOX4	Q06945	474 aa	Predicted RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	ELAVL2	Q12926	359 aa	Known RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	MTAP	Q13126	283 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	DMP1	Q13316	513 aa	Predicted RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	COL9A2	Q14055	689 aa	Predicted RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	SEZ6	Q53EL9	994 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	RILPL1	Q5EBL4	403 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	PPM1L	Q5SGD2	360 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	LIN9	Q5TKA1	542 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	CD300LG	Q6UXG3	332 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	C3orf58	Q8NDZ4	430 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	ING5	Q8WYH8	240 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	DRC1	Q96MC2	740 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	PNMA5	Q96PV4	448 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	MRPL4	Q9BYD3	311 aa	Known RBP	11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	TMEM134	Q9H6X4	195 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	PTPRH	Q9HD43	1115 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	ARHGAP28	Q9P2N2	729 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	FBXW11	Q9UKB1	542 aa		11.58	□□□□□ -0.56
HMGN1-215	ENST00000485550	GDF9	O60383	454 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	FGFR3	P22607	806 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	RPS9	P46781	194 aa	Known RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	ATP2C1	P98194	919 aa	Predicted RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	FZD5	Q13467	585 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	DHX8	Q14562	1220 aa	Known RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	UPP1	Q16831	310 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	SLC7A14	Q8TBB6	771 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	CDK5RAP3	Q96JB5	506 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	ZMAT2	Q96NC0	199 aa	Known RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	ACAP3	Q96P50	834 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	PLA2G2F	Q9BZM2	168 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	HCFC1R1	Q9NWW0	138 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	NDRG2	Q9UN36	371 aa	Known RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	RBM19	Q9Y4C8	960 aa	Known RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	CDY1	Q9Y6F8	540 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	FASN	P49327	2511 aa	Known RBP	11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	PHLPP2	Q6ZVD8	1323 aa		11.57	□□□□□ -0.56
HMGN1-215	ENST00000485550	EML5	Q05BV3	1969 aa		11.56	□□□□□ -0.56
HMGN1-215	ENST00000485550	SHISA7	A6NL88	538 aa		11.56	□□□□□ -0.56
HMGN1-215	ENST00000485550	PODXL	O00592	558 aa		11.56	□□□□□ -0.56
HMGN1-215	ENST00000485550	C1R	P00736	705 aa		11.56	□□□□□ -0.56
HMGN1-215	ENST00000485550	PLA2G4B	P0C869	781 aa		11.56	□□□□□ -0.56
HMGN1-215	ENST00000485550	MCF2	P10911	925 aa		11.56	□□□□□ -0.56
HMGN1-215	ENST00000485550	TDGF1	P13385	188 aa		11.56	□□□□□ -0.56

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