RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 ACO2Q99798 780 aaKnown RBP5.78□□□□□ -1.48
CCDC39-205ENST00000485055 VPS11Q9H270 941 aa5.78□□□□□ -1.48
CCDC39-205ENST00000485055 RTEL1Q9NZ71 1219 aa5.78□□□□□ -1.48
CCDC39-205ENST00000485055 SERTAD1Q9UHV2 236 aa5.78□□□□□ -1.48
CCDC39-205ENST00000485055 ITGB1BP2Q9UKP3 347 aa5.78□□□□□ -1.48
CCDC39-205ENST00000485055 ZMYND8Q9ULU4 1186 aaPredicted RBP5.78□□□□□ -1.48
CCDC39-205ENST00000485055 ATP11BQ9Y2G3 1177 aa5.78□□□□□ -1.48
CCDC39-205ENST00000485055 ZMYM2Q9UBW7 1377 aa5.78□□□□□ -1.48
CCDC39-205ENST00000485055 FAM25EA8MYX2 175 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PAPLNO95428 1278 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 FGBP02675 491 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 IQCF3P0C7M6 154 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 RAG1P15918 1043 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 RPS6KB1P23443 525 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 SLC16A2P36021 539 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CAMK2GQ13555 558 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PDCD2Q16342 344 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 MMEL1Q495T6 779 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF697Q5TEC3 545 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CNKSR3Q6P9H4 555 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PDZD4Q76G19 769 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PLPPR4Q7Z2D5 763 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 SLC35G2Q8TBE7 412 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 BICD2Q8TD16 824 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 RRP36Q96EU6 259 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 MOGAT1Q96PD6 335 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 TTYH1Q9H313 450 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 EHMT1Q9H9B1 1298 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 AGO4Q9HCK5 861 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 TCF7L1Q9HCS4 588 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHB11Q9Y5F2 797 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CNTNAP5Q8WYK1 1306 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CYP3A7-CYP3A51PA0A087WV96 503 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 B4E171 279 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 IFIT3O14879 490 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 FSCN2O14926 492 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 C6orf222P0C671 652 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 TXNP10599 105 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PYGMP11217 842 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CKMT1AP12532 417 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CYP3A7P24462 503 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PRIM2P49643 509 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PSEN2P49810 448 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 MRPS9P82933 396 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 MGAT3Q09327 533 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CTC1Q2NKJ3 1217 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 GNPTABQ3T906 1256 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CCDC38Q502W7 563 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 SETMARQ53H47 684 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 DESI1Q6ICB0 168 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PDE12Q6L8Q7 609 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 KIAA1211Q6ZU35 1233 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CHST15Q7LFX5 561 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 FGD2Q7Z6J4 655 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 SDCCAG8Q86SQ7 713 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 FBXO16Q8IX29 292 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 USP38Q8NB14 1042 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 FANCBQ8NB91 859 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 IPMKQ8NFU5 416 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF75CPQ92670 426 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 GSDMAQ96QA5 445 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 ALG1Q9BT22 464 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 TTLL2Q9BWV7 592 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 KLK14Q9P0G3 267 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CFAP45Q9UL16 551 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHA1Q9Y5I3 950 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 FNDC1Q4ZHG4 1894 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 STK36Q9NRP7 1315 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 C5orf67F2Z3F1 127 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PLD2O14939 933 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 DYNC1LI2O43237 492 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 KLHL41O60662 606 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 TADA3O75528 432 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CYP17A1P05093 508 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 ACTN1P12814 892 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 SELPP16109 830 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 GUCY2CP25092 1073 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 SREBF1P36956 1147 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 LIMK1P53667 647 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 HAND2P61296 217 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PSMD6Q15008 389 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 WSCD2Q2TBF2 565 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 C9orf50Q5SZB4 431 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 FKBP15Q5T1M5 1219 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 RNF19BQ6ZMZ0 732 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 GALNTL5Q7Z4T8 443 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 RALYLQ86SE5 291 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CMIPQ8IY22 773 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PLD6Q8N2A8 252 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 RDM1Q8NG50 284 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CENPIQ92674 756 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 USP26Q9BXU7 913 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 ZMYND12Q9H0C1 365 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 KCTD10Q9H3F6 313 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 HIPK3Q9H422 1215 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 DEF6Q9H4E7 631 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CYP4F11Q9HBI6 524 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CHCHD3Q9NX63 227 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHB10Q9UN67 800 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms