RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	PCDHGA8	Q9Y5G5	932 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	PCDHGA7	Q9Y5G6	932 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	PCDHGA6	Q9Y5G7	932 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	PCDHGA3	Q9Y5H0	932 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	PCDHGA2	Q9Y5H1	932 aa		4.91	□□□□□ -1.62
VPS8-223	ENST00000485024	ANO9	A1A5B4	782 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	UNC119B	A6NIH7	251 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	RASSF10	A6NK89	507 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	MGST3	O14880	152 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	PRPF3	O43395	683 aa	Known RBP	4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	NRP2	O60462	931 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	APOL3	O95236	402 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	RPLP2	P05387	115 aa	Known RBP	4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	XPA	P23025	273 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	ODF1	Q14990	250 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	SAFB	Q15424	915 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	CT83	Q5H943	113 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	TOR2A	Q5JU69	321 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	CATIP	Q7Z7H3	387 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	CLEC14A	Q86T13	490 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	CMIP	Q8IY22	773 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	PJA1	Q8NG27	643 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	OR14C36	Q8NHC7	312 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	SVIP	Q8NHG7	77 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	SLC35G2	Q8TBE7	412 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	FATE1	Q969F0	183 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	MYL10	Q9BUA6	226 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	QRSL1	Q9H0R6	528 aa	Known RBP	4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	POFUT1	Q9H488	388 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	USP25	Q9UHP3	1055 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	PPP2R3B	Q9Y5P8	575 aa		4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-223	ENST00000485024	RNASET2	O00584	256 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	NDUFS2	O75306	463 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	PRL	P01236	227 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	IFIT2	P09913	472 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	SRSF2	Q01130	221 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	SLC6A3	Q01959	620 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	MUM1	Q2TAK8	710 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	ATAT1	Q5SQI0	421 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	KRT40	Q6A162	431 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	KANSL1	Q7Z3B3	1105 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	KCNK18	Q7Z418	384 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	PLA2G15	Q8NCC3	412 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	ASB10	Q8WXI3	467 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	EAF2	Q96CJ1	260 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	C1GALT1C1	Q96EU7	318 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	LRGUK	Q96M69	825 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	MPHOSPH6	Q99547	160 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	KIAA1586	Q9HCI6	787 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	KMT5A	Q9NQR1	393 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	NCDN	Q9UBB6	729 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	CHST2	Q9Y4C5	530 aa		4.89	□□□□□ -1.63
VPS8-223	ENST00000485024	FANCD2	Q9BXW9	1451 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	TSPOAP1	O95153	1857 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	SETBP1	Q9Y6X0	1596 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	PRSS38	A1L453	326 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	AP1G1	O43747	822 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	POU2F2	P09086	479 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	CCKBR	P32239	447 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	NRG3	P56975	720 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	KIF23	Q02241	960 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	PITRM1	Q5JRX3	1037 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	SYCP2L	Q5T4T6	812 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	PPP4R3A	Q6IN85	833 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	GDF7	Q7Z4P5	450 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	FAM43A	Q8N2R8	423 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	CDYL2	Q8N8U2	506 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	RUNDC1	Q96C34	613 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	HIST1H2AH	Q96KK5	128 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	HIST1H2AJ	Q99878	128 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	NDC1	Q9BTX1	674 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	ACE2	Q9BYF1	805 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	KCTD10	Q9H3F6	313 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	MS4A5	Q9H3V2	200 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	IFT122	Q9HBG6	1241 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	MYPN	Q86TC9	1320 aa		4.88	□□□□□ -1.63
VPS8-223	ENST00000485024	ELL2	O00472	640 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	HRG	P04196	525 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	JUN	P05412	331 aa	Known RBP	4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	PFKM	P08237	780 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	CLEC2L	P0C7M8	214 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	OSM	P13725	252 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	C5AR1	P21730	350 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	BMPR1A	P36894	532 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	LGALS4	P56470	323 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	PROK1	P58294	105 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	SIM1	P81133	766 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	GUCY1B3	Q02153	619 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	MPP3	Q13368	585 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	TP53BP2	Q13625	1128 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	UAP1L1	Q3KQV9	507 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	COBLL1	Q53SF7	1204 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	THEMIS2	Q5TEJ8	643 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	USP45	Q70EL2	814 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	CHST15	Q7LFX5	561 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms