RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 LRPAP1P30533 357 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 TFAMQ00059 246 aaKnown RBP17.59■□□□□ 0.41
DDR1-246ENST00000485023 CREMQ03060 361 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 FAM160A1Q05DH4 1040 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 PNOCQ13519 176 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 SMAD2Q15796 467 aaKnown RBP17.59■□□□□ 0.41
DDR1-246ENST00000485023 BMT2Q1RMZ1 405 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 LMBRD2Q68DH5 695 aaPredicted RBP17.59■□□□□ 0.41
DDR1-246ENST00000485023 HS2ST1Q7LGA3 356 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 CCDC47Q96A33 483 aaKnown RBP17.59■□□□□ 0.41
DDR1-246ENST00000485023 S1PR5Q9H228 398 aa17.59■□□□□ 0.41
DDR1-246ENST00000485023 PLXNA3P51805 1871 aa17.58■□□□□ 0.41
DDR1-246ENST00000485023 TGM5O43548 720 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 HOXB8P17481 243 aaPredicted RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 SP100P23497 879 aaPredicted RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 SSTR3P32745 418 aaPredicted RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 ARPP19P56211 112 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 KNOP1Q1ED39 458 aaKnown RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 VARS2Q5ST30 1063 aaKnown RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 C9orf57Q5W0N0 161 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 RSPO2Q6UXX9 243 aaPredicted RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 RDH13Q8NBN7 331 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 ERCC4Q92889 916 aaPredicted RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 CLSTN3Q9BQT9 956 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 PDE11AQ9HCR9 933 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 DPP3Q9NY33 737 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 FNIP2Q9P278 1114 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 MAPK8IP1Q9UQF2 711 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 DERAQ9Y315 318 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 C2CD2Q9Y426 696 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 TIMM13Q9Y5L4 95 aaPredicted RBP17.58■□□□□ 0.4
DDR1-246ENST00000485023 CDY1Q9Y6F8 540 aa17.58■□□□□ 0.4
DDR1-246ENST00000485023 VWA8A3KMH1 1905 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 ANK1P16157 1881 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 OR1D2P34982 312 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 PSMD2Q13200 908 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 SNW1Q13573 536 aaKnown RBP17.57■□□□□ 0.4
DDR1-246ENST00000485023 CES5AQ6NT32 575 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 PDXDC1Q6P996 788 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 DSTYKQ6XUX3 929 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 ENGASEQ8NFI3 743 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 CCDC34Q96HJ3 373 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 SUSD3Q96L08 255 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 TSPAN18Q96SJ8 248 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 SFXN1Q9H9B4 322 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 CD320Q9NPF0 282 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 MTRRQ9UBK8 725 aa17.57■□□□□ 0.4
DDR1-246ENST00000485023 PTPRJQ12913 1337 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 ZNF233A6NK53 670 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 SYN3O14994 580 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 KIAA0391O15091 583 aaKnown RBP17.56■□□□□ 0.4
DDR1-246ENST00000485023 SPTLC1O15269 473 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 RFPL2O75678 378 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 ZP2Q05996 745 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
DDR1-246ENST00000485023 SNRNP35Q16560 246 aaKnown RBP17.56■□□□□ 0.4
DDR1-246ENST00000485023 ANKS3Q6ZW76 656 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 GPR65Q8IYL9 337 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 SMYD4Q8IYR2 804 aaPredicted RBP17.56■□□□□ 0.4
DDR1-246ENST00000485023 MTMR12Q9C0I1 747 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 ADAM7Q9H2U9 754 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 PCDHB8Q9UN66 801 aa17.56■□□□□ 0.4
DDR1-246ENST00000485023 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.56■□□□□ 0.4
DDR1-246ENST00000485023 TNFRSF10AO00220 468 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 RHOBTB3O94955 611 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 ITGB3P05106 788 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 TMEM191BP0C7N4 346 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 POLR2BP30876 1174 aaKnown RBP17.55■□□□□ 0.4
DDR1-246ENST00000485023 POU5F1Q01860 360 aaKnown RBP17.55■□□□□ 0.4
DDR1-246ENST00000485023 CTXN3Q4LDR2 81 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 SCARA3Q6AZY7 606 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 ADHFE1Q8IWW8 467 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 XXYLT1Q8NBI6 393 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 KREMEN2Q8NCW0 462 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 SUSD6Q92537 303 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 CCDC127Q96BQ5 260 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 RPGRIP1Q96KN7 1286 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 TSHZ2Q9NRE2 1034 aa17.55■□□□□ 0.4
DDR1-246ENST00000485023 ANO9A1A5B4 782 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 PIRO00625 290 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 EXOC3O60645 756 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 KINO60870 393 aaKnown RBP17.54■□□□□ 0.4
DDR1-246ENST00000485023 KRT19P08727 400 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 DLATP10515 647 aaKnown RBP17.54■□□□□ 0.4
DDR1-246ENST00000485023 LILRA4P59901 499 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 ROR1Q01973 937 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 ITIH3Q06033 890 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 ZNF280DQ6N043 979 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 ELMSAN1Q6PJG2 1045 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 GJD3Q8N144 294 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 C1orf127Q8N9H9 656 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 APPL2Q8NEU8 664 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 SENP8Q96LD8 212 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 KCTD10Q9H3F6 313 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 POMKQ9H5K3 350 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 KIAA1586Q9HCI6 787 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 FBXW11Q9UKB1 542 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 AGAP1Q9UPQ3 857 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 BACE2Q9Y5Z0 518 aa17.54■□□□□ 0.4
DDR1-246ENST00000485023 CCDC195A0A1B0GUA6 201 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms