RNA–Protein interactions for RNA: ENST00000484428.5

C1orf61-216, Transcript of chromosome 1 open reading frame 61, human

TSL 3

Gene C1orf61, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-216	ENST00000484428	PRR23A	A6NEV1	266 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	PRRG1	O14668	218 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	MICAL2	O94851	1124 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	OAZ2	O95190	189 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	SEC24A	O95486	1093 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	LRG1	P02750	347 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	PLCG1	P19174	1290 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	RFX1	P22670	979 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	MCM4	P33991	863 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	AARS	P49588	968 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	LIG4	P49917	911 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	SF3A1	Q15459	793 aa	Known RBP	18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	CTXN3	Q4LDR2	81 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	ZNF280D	Q6N043	979 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	FRMD5	Q7Z6J6	570 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	MYCT1	Q8N699	235 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	SHD	Q96IW2	340 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	FIZ1	Q96SL8	496 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	DDX23	Q9BUQ8	820 aa	Known RBP	18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	CYP4F11	Q9HBI6	524 aa		18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	UBQLN1	Q9UMX0	589 aa	Known RBP	18.92	■□□□□ 0.62
C1orf61-216	ENST00000484428	RIF1	Q5UIP0	2472 aa	Known RBP	18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428		A0A0B4J269	797 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	LACTBL1	A8MY62	500 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	HNRNPDL	O14979	420 aa	Known RBP	18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	TRAK2	O60296	914 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	ECI2	O75521	394 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	FAM13A	O94988	1023 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	ABCD1	P33897	745 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	TNFSF9	P41273	254 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	MATR3	P43243	847 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	ARPP19	P56211	112 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	GTF2B	Q00403	316 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	SPAG1	Q07617	926 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	MCM6	Q14566	821 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	KARS	Q15046	597 aa	Known RBP	18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	ENOX2	Q16206	610 aa	Known RBP	18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	PRSS36	Q5K4E3	855 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	POTEH	Q6S545	545 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	KIF12	Q96FN5	646 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	OXCT2	Q9BYC2	517 aa	Predicted RBP	18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	CCSER1	Q9C0I3	900 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	AFF4	Q9UHB7	1163 aa	Known RBP	18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	INSL5	Q9Y5Q6	135 aa		18.91	■□□□□ 0.62
C1orf61-216	ENST00000484428	MYH11	P35749	1972 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428		K7ENM7	598 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	OGT	O15294	1046 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	MARCKS	P29966	332 aa	Predicted RBP	18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	DDIT3	P35638	169 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	PFKP	Q01813	784 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	PRKCQ	Q04759	706 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	PPP2R3A	Q06190	1150 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	DHX8	Q14562	1220 aa	Known RBP	18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	SLC44A4	Q53GD3	710 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	ZBTB41	Q5SVQ8	909 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	CD302	Q8IX05	232 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	BEST2	Q8NFU1	509 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	PJA1	Q8NG27	643 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	ING5	Q8WYH8	240 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	NKD2	Q969F2	451 aa	Predicted RBP	18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	KXD1	Q9BQD3	176 aa		18.9	■□□□□ 0.62
C1orf61-216	ENST00000484428	PTPRZ1	P23471	2315 aa	Predicted RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	PDCD11	Q14690	1871 aa	Known RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	XPOT	O43592	962 aa	Known RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	DCN	P07585	359 aa	Known RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	YWHAH	Q04917	246 aa	Predicted RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	ADCY1	Q08828	1119 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	SNW1	Q13573	536 aa	Known RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	PTPA	Q15257	358 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	SLC39A4	Q6P5W5	647 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	MAP4K3	Q8IVH8	894 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	TMEM130	Q8N3G9	435 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	LARP4B	Q92615	738 aa	Known RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	MCRS1	Q96EZ8	462 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	CORO1B	Q9BR76	489 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	ST6GALNAC4	Q9H4F1	302 aa		18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	RPF1	Q9H9Y2	349 aa	Known RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	CPSF3	Q9UKF6	684 aa	Known RBP	18.89	■□□□□ 0.61
C1orf61-216	ENST00000484428	KANSL1L	A0AUZ9	987 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	ZNF197	O14709	1029 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	TBCA	O75347	108 aa	Known RBP	18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	KRT18	P05783	430 aa	Known RBP	18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	GLUL	P15104	373 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	CEBPB	P17676	345 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	PDC	P20941	246 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	PAX3	P23760	479 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	MLF2	Q15773	248 aa	Predicted RBP	18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	SPATA1	Q5VX52	437 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	RASSF8	Q8NHQ8	419 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	ELSPBP1	Q96BH3	223 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	OSBPL6	Q9BZF3	934 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	FOXQ1	Q9C009	403 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	STYXL1	Q9Y6J8	313 aa		18.88	■□□□□ 0.61
C1orf61-216	ENST00000484428	VNN2	O95498	520 aa		18.87	■□□□□ 0.61
C1orf61-216	ENST00000484428	TYMP	P19971	482 aa		18.87	■□□□□ 0.61
C1orf61-216	ENST00000484428	NMT1	P30419	496 aa	Known RBP	18.87	■□□□□ 0.61
C1orf61-216	ENST00000484428	CCR2	P41597	374 aa		18.87	■□□□□ 0.61
C1orf61-216	ENST00000484428	EPHA5	P54756	1037 aa		18.87	■□□□□ 0.61
C1orf61-216	ENST00000484428	SPECC1	Q5M775	1068 aa		18.87	■□□□□ 0.61
C1orf61-216	ENST00000484428	CYP4A22	Q5TCH4	519 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms