RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 RECQL4O94761 1208 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 TMEM191BP0C7N4 346 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 GPNMBQ14956 572 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 TEX35Q5T0J7 233 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 JADE1Q6IE81 842 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 TRAPPC11Q7Z392 1133 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 HACE1Q8IYU2 909 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 RNF10Q8N5U6 811 aaKnown RBP18.46■□□□□ 0.55
MRPL28-210ENST00000483764 ANKRD36BP1Q96IX9 119 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 SNX27Q96L92 541 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 MTMR12Q9C0I1 747 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 DEF6Q9H4E7 631 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 TMEM39AQ9NV64 488 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 PARP2Q9UGN5 583 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 RAB21Q9UL25 225 aa18.46■□□□□ 0.55
MRPL28-210ENST00000483764 BZW2Q9Y6E2 419 aaKnown RBP18.46■□□□□ 0.55
MRPL28-210ENST00000483764 PJA2O43164 708 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 ZNF623O75123 536 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 LRRN2O75325 713 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 PARNO95453 639 aaKnown RBP18.45■□□□□ 0.54
MRPL28-210ENST00000483764 TNNC2P02585 160 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 NFICP08651 508 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 CLTBP09497 229 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 UCHL3P15374 230 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 EN2P19622 333 aaPredicted RBP18.45■□□□□ 0.54
MRPL28-210ENST00000483764 RAB27AP51159 221 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 POLR2FP61218 127 aaKnown RBP18.45■□□□□ 0.54
MRPL28-210ENST00000483764 TMEM132DQ14C87 1099 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 C10orf76Q5T2E6 689 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 PDXDC1Q6P996 788 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 ALKAL1Q6UXT8 129 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 NT5DC4Q86YG4 428 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 ALS2CR12Q96Q35 445 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 PPP1R12CQ9BZL4 782 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 FBXL5Q9UKA1 691 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 GUCA1BQ9UMX6 200 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 DERAQ9Y315 318 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 C2CD2Q9Y426 696 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 SAR1BQ9Y6B6 198 aa18.45■□□□□ 0.54
MRPL28-210ENST00000483764 KIAA0100Q14667 2235 aaKnown RBP18.45■□□□□ 0.54
MRPL28-210ENST00000483764 A0A0U1RQF3 1178 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 VNN1O95497 513 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 HLA-DRAP01903 254 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 SERPING1P05155 500 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 SKIP12755 728 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 ITGA4P13612 1032 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 CYP2C18P33260 490 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 CCL23P55773 120 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 ITIH3Q06033 890 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 FAM43BQ6ZT52 329 aaPredicted RBP18.44■□□□□ 0.54
MRPL28-210ENST00000483764 MRPL10Q7Z7H8 261 aaKnown RBP18.44■□□□□ 0.54
MRPL28-210ENST00000483764 TNS4Q8IZW8 715 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 SECISBP2LQ93073 1101 aaKnown RBP18.44■□□□□ 0.54
MRPL28-210ENST00000483764 FTHL17Q9BXU8 183 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 IRX2Q9BZI1 471 aaPredicted RBP18.44■□□□□ 0.54
MRPL28-210ENST00000483764 NLRC4Q9NPP4 1024 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 CNTN3Q9P232 1028 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 APEX2Q9UBZ4 518 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 JRKLQ9Y4A0 524 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 AKR1B10O60218 316 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 PIK3CAP42336 1068 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 NCOA4Q13772 614 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 PLEKHG4Q58EX7 1191 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 XKR4Q5GH76 650 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 PHLDB3Q6NSJ2 640 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 RRAGAQ7L523 313 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 RTN4RL1Q86UN2 441 aaPredicted RBP18.44■□□□□ 0.54
MRPL28-210ENST00000483764 LRRN4CLQ8ND94 238 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 BAP1Q92560 729 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 KIF12Q96FN5 646 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 SCLYQ96I15 445 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 TSPAN18Q96SJ8 248 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 WNT8AQ9H1J5 351 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 CXCL16Q9H2A7 254 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 RGS18Q9NS28 235 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 KLK14Q9P0G3 267 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 FHOD1Q9Y613 1164 aa18.44■□□□□ 0.54
MRPL28-210ENST00000483764 ZC3H11AO75152 810 aaKnown RBP eCLIP18.43■□□□□ 0.54
MRPL28-210ENST00000483764 CST3P01034 146 aaPredicted RBP18.43■□□□□ 0.54
MRPL28-210ENST00000483764 KIF11P52732 1056 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 CBX1P83916 185 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 WDR44Q5JSH3 913 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 SFMBT2Q5VUG0 894 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 CCDC70Q6NSX1 233 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 CC2D1AQ6P1N0 951 aaPredicted RBP18.43■□□□□ 0.54
MRPL28-210ENST00000483764 GJB7Q6PEY0 223 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 UBE2Q1Q7Z7E8 422 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 DBF4BQ8NFT6 615 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 SEPT8Q92599 483 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 ZMAT2Q96NC0 199 aaKnown RBP18.43■□□□□ 0.54
MRPL28-210ENST00000483764 PARD6BQ9BYG5 372 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 DNAJC12Q9UKB3 198 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 PCDHA13Q9Y5I0 950 aa18.43■□□□□ 0.54
MRPL28-210ENST00000483764 SMIM28A0A1B0GU29 152 aa18.42■□□□□ 0.54
MRPL28-210ENST00000483764 TARSL2A2RTX5 802 aaKnown RBP18.42■□□□□ 0.54
MRPL28-210ENST00000483764 PNMA6AP0CW24 399 aaPredicted RBP18.42■□□□□ 0.54
MRPL28-210ENST00000483764 KCNE1P15382 129 aa18.42■□□□□ 0.54
MRPL28-210ENST00000483764 RFX1P22670 979 aa18.42■□□□□ 0.54
MRPL28-210ENST00000483764 GPS2Q13227 327 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms