RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RPL9P32969 192 aaKnown RBP19.24■□□□□ 0.67
CPNE1-224ENST00000483359 CLDN10P78369 228 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 GPM6BQ13491 265 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 DHX40Q8IX18 779 aaKnown RBP19.24■□□□□ 0.67
CPNE1-224ENST00000483359 SLC35C1Q96A29 364 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 PRDM12Q9H4Q4 367 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.24■□□□□ 0.671e-6■■■■■ 117.8
CPNE1-224ENST00000483359 MAGEC2Q9UBF1 373 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-224ENST00000483359 ITGA11Q9UKX5 1188 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 MTIF2P46199 727 aaKnown RBP19.24■□□□□ 0.67
CPNE1-224ENST00000483359 GRIN2CQ14957 1233 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 NCAPHQ15003 741 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 DCLRE1AQ6PJP8 1040 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 SV2AQ7L0J3 742 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 ELMO3Q96BJ8 720 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 B3GALT6Q96L58 329 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 BPIFA3Q9BQP9 254 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 VN1R3Q9BXE9 311 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 TSPY26PQ9H489 355 aa19.24■□□□□ 0.67
CPNE1-224ENST00000483359 R3HCC1Q9Y3T6 440 aaKnown RBP19.24■□□□□ 0.67
CPNE1-224ENST00000483359 ANO9A1A5B4 782 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 BECN2A8MW95 431 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 KCNJ18B7U540 433 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 PIRO00625 290 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 IKBKBO14920 756 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 GRM6O15303 877 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CST3P01034 146 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-224ENST00000483359 RB1P06400 928 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 FXR1P51114 621 aaKnown RBP eCLIP19.23■□□□□ 0.67
CPNE1-224ENST00000483359 KRT17Q04695 432 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 KCNJ12Q14500 433 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CBWD6Q4V339 395 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CBWD3Q5JTY5 395 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CBWD5Q5RIA9 395 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 FUT10Q6P4F1 479 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CD300LGQ6UXG3 332 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 LUZP1Q86V48 1076 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 FAM114A1Q8IWE2 563 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 TRIM59Q8IWR1 403 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CXorf38Q8TB03 319 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 POF1BQ8WVV4 589 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 GPR62Q9BZJ7 368 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CBX8Q9HC52 389 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.23■□□□□ 0.67
CPNE1-224ENST00000483359 TRANK1O15050 2925 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 SCN1AP35498 2009 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 TMEM265A0A087WTH1 108 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 H3BNC9 293 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 C4BPAP04003 597 aaKnown RBP19.23■□□□□ 0.67
CPNE1-224ENST00000483359 DNAJB1P25685 340 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 CA8P35219 290 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 MXI1P50539 228 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 MARSP56192 900 aaKnown RBP19.23■□□□□ 0.67
CPNE1-224ENST00000483359 TRPC3Q13507 836 aa19.23■□□□□ 0.67
CPNE1-224ENST00000483359 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-224ENST00000483359 SF3B1O75533 1304 aaKnown RBP eCLIP19.22■□□□□ 0.672e-6■■■■■ 85.9
CPNE1-224ENST00000483359 TMEM189-UBE2V1I3L0A0 370 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 SPTLC1O15269 473 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 PIK3CAP42336 1068 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 AP3M2P53677 418 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 PLCB3Q01970 1234 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 ZACNQ401N2 412 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 TAS1R1Q7RTX1 841 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 SPPL3Q8TCT6 385 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 TAS1R2Q8TE23 839 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 TMEM8AQ9HCN3 771 aa19.22■□□□□ 0.67
CPNE1-224ENST00000483359 VNN1O95497 513 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 PRKCSHP14314 528 aaPredicted RBP19.21■□□□□ 0.67
CPNE1-224ENST00000483359 TAF6P49848 677 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 RBP5P82980 135 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 NCOA4Q13772 614 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 IQCB1Q15051 598 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 TIGD5Q53EQ6 642 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 CDKAL1Q5VV42 579 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 KRT39Q6A163 491 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 CEP57Q86XR8 500 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 VPS52Q8N1B4 723 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 ZNF560Q96MR9 790 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 PCDHGC5Q9Y5F6 944 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 CARNS1A5YM72 827 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 C2CD2LO14523 706 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 LRRN2O75325 713 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 LILRA4P59901 499 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 ZNF445P59923 1031 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 MYL6P60660 151 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 ENPEPQ07075 957 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 KCNH2Q12809 1159 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 MYO9BQ13459 2157 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 TCP11X2Q5H9J9 407 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 FAM171A1Q5VUB5 890 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 C15orf39Q6ZRI6 1047 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 RNF214Q8ND24 703 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 FAM200AQ8TCP9 573 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 AUTS2Q8WXX7 1259 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 HSD3B7Q9H2F3 369 aa19.21■□□□□ 0.67
CPNE1-224ENST00000483359 PUF60Q9UHX1 559 aaKnown RBP19.21■□□□□ 0.67
CPNE1-224ENST00000483359 SMTNL1A8MU46 457 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 PES1O00541 588 aaKnown RBP19.2■□□□□ 0.66
CPNE1-224ENST00000483359 STX10O60499 249 aa19.2■□□□□ 0.66
CPNE1-224ENST00000483359 LPXNO60711 386 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms