RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 PLEKHG4Q58EX7 1191 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TTC23LQ6PF05 361 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 RNF111Q6ZNA4 994 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 RIPOR1Q6ZS17 1223 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 KBTBD3Q8NAB2 608 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 HCAR2Q8TDS4 363 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 KAZALD1Q96I82 304 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 HAUS7Q99871 368 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 MRPS26Q9BYN8 205 aaKnown RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 ROPN1BQ9BZX4 212 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 QTRT2Q9H974 415 aaKnown RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 ROPN1Q9HAT0 212 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 CNGB3Q9NQW8 809 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 SACM1LQ9NTJ5 587 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 GRHL1Q9NZI5 618 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 ERVK-11Q9UQG0 969 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 NEU2Q9Y3R4 380 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 GPSM3Q9Y4H4 160 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 PARP4Q9UKK3 1724 aaKnown RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 FAM205CA6NFA0 338 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TSPY2A6NKD2 308 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 PIK3CDO00329 1044 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 ITM2AO43736 263 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 BAIAP3O94812 1187 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 ABCB1P08183 1280 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 CD48P09326 243 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TSPY3P0CV98 308 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TSPY8P0CW00 308 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 PGM1P36871 562 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 SLC5A3P53794 718 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 HIRAP54198 1017 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TSPY1Q01534 308 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TLR1Q15399 786 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TIGD2Q4W5G0 525 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TMEM63BQ5T3F8 832 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 PPP1R21Q6ZMI0 780 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 MICU3Q86XE3 530 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 TTC5Q8N0Z6 440 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 LRRC57Q8N9N7 239 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 C12orf50Q8NA57 414 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 LILRB4Q8NHJ6 448 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 CHPT1Q8WUD6 406 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 HACD3Q9P035 362 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 C6orf203Q9P0P8 240 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 CRNNQ9UBG3 495 aaPredicted RBP8.26□□□□□ -1.09
COL4A5-205ENST00000483338 GTF3C4Q9UKN8 822 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 PCDHGA11Q9Y5H2 935 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 MAST3O60307 1309 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 CASZ1Q86V15 1759 aa8.26□□□□□ -1.09
COL4A5-205ENST00000483338 A8MU76 341 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 EDF1O60869 148 aaKnown RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 C6orf222P0C671 652 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 RBP3P10745 1247 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 RARGP13631 454 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 DR1Q01658 176 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 FOLH1Q04609 750 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 TRIM71Q2Q1W2 868 aaKnown RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 GJC2Q5T442 439 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 MAP3K21Q5TCX8 1036 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 TWF2Q6IBS0 349 aaKnown RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 DTHD1Q6ZMT9 781 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 TMC7Q7Z402 723 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 KSR1Q8IVT5 923 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 ALLCQ8N6M5 410 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 NATD1Q8N6N6 113 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 BRSK1Q8TDC3 778 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 GIPC2Q8TF65 315 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 PRR11Q96HE9 360 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 PLEKHA8Q96JA3 519 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 SLC26A6Q9BXS9 759 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 PAIP1Q9H074 479 aaKnown RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 FOXP1Q9H334 677 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 RNF41Q9H4P4 317 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 MMRN2Q9H8L6 949 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 AS3MTQ9HBK9 375 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 CABP5Q9NP86 173 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 FAM217BQ9NTX9 383 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 NKIRAS1Q9NYS0 192 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 RSL24D1Q9UHA3 163 aaKnown RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 DENND2AQ9ULE3 1009 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 NRKQ7Z2Y5 1582 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 C2CD2LO14523 706 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 FOXP2O15409 715 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 TLR2O60603 784 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 PHF2O75151 1096 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 MRC1P22897 1456 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 ADSLP30566 484 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-205ENST00000483338 ETV3P41162 512 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 ZNF132P52740 706 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 ACTR3P61158 418 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 KRT81Q14533 505 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 CYP2A13Q16696 494 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 KYNUQ16719 465 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 KIAA1755Q5JYT7 1200 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 AGAP9Q5VTM2 703 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 LSMEM2Q8N112 164 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 SPATA5Q8NB90 893 aa8.25□□□□□ -1.09
COL4A5-205ENST00000483338 PDZD8Q8NEN9 1154 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms