RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PLCG1P19174 1290 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 RPL9P32969 192 aaKnown RBP13.97□□□□□ -0.17
COL21A1-209ENST00000482933 MCL1Q07820 350 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 TDGQ13569 410 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 RAB33AQ14088 237 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 KARSQ15046 597 aaKnown RBP13.97□□□□□ -0.17
COL21A1-209ENST00000482933 KYAT1Q16773 422 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 RTL10Q7L3V2 364 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 HAUS6Q7Z4H7 955 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 MYCT1Q8N699 235 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 LARP4BQ92615 738 aaKnown RBP13.97□□□□□ -0.17
COL21A1-209ENST00000482933 RAD54LQ92698 747 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 ZMAT2Q96NC0 199 aaKnown RBP13.97□□□□□ -0.17
COL21A1-209ENST00000482933 REEP2Q9BRK0 252 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 KCNK12Q9HB15 430 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 PARVGQ9HBI0 331 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 BLOC1S4Q9NUP1 217 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL21A1-209ENST00000482933 MTRRQ9UBK8 725 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 CCDC39Q9UFE4 941 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.97□□□□□ -0.17
COL21A1-209ENST00000482933 BACE2Q9Y5Z0 518 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 C8AP07357 584 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 SYT1P21579 422 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 HOXA9P31269 272 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 DDIT3P35638 169 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 BRCC3P46736 316 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 LIG4P49917 911 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 ZNF131P52739 623 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 GRIN1Q05586 938 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 SOX4Q06945 474 aaPredicted RBP13.96□□□□□ -0.18
COL21A1-209ENST00000482933 MCM6Q14566 821 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 UVSSAQ2YD98 709 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 PPM1LQ5SGD2 360 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 CD300LGQ6UXG3 332 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 C3orf58Q8NDZ4 430 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 NXPE3Q969Y0 559 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 PLEKHA5Q9HAU0 1116 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 EPS15L1Q9UBC2 864 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 NUB1Q9Y5A7 615 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 TRIOO75962 3097 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 VWA8A3KMH1 1905 aa13.96□□□□□ -0.18
COL21A1-209ENST00000482933 ZNF318Q5VUA4 2279 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 K7ENM7 598 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 SYN3O14994 580 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 TRAK2O60296 914 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 XYLBO75191 536 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
COL21A1-209ENST00000482933 TKTP29401 623 aaKnown RBP13.95□□□□□ -0.18
COL21A1-209ENST00000482933 AVPR2P30518 371 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 OR1D2P34982 312 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 TXLNAP40222 546 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 PTPAQ15257 358 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 SLC10A6Q3KNW5 377 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 ZHX3Q9H4I2 956 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 TBX20Q9UMR3 447 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 DUSP12Q9UNI6 340 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 SRPRBQ9Y5M8 271 aaKnown RBP13.95□□□□□ -0.18
COL21A1-209ENST00000482933 CLIC4Q9Y696 253 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 CDY1Q9Y6F8 540 aa13.95□□□□□ -0.18
COL21A1-209ENST00000482933 K7ELQ4 463 aaPredicted RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 HNRNPDLO14979 420 aaKnown RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 N4BP1O75113 896 aaKnown RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 PIGRP01833 764 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 POU2F2P09086 479 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 CLTAP09496 248 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 NHLH1Q02575 133 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 RESTQ13127 1097 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 AXDND1Q5T1B0 1012 aaPredicted RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 GET4Q7L5D6 327 aaPredicted RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 LRRC15Q8TF66 581 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 TSPAN18Q96SJ8 248 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 MFSD1Q9H3U5 465 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 SMOC2Q9H3U7 446 aa13.94□□□□□ -0.18
COL21A1-209ENST00000482933 ZSCAN16Q9H4T2 348 aaPredicted RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 ZFP37Q9Y6Q3 630 aaPredicted RBP13.94□□□□□ -0.18
COL21A1-209ENST00000482933 H7C4K7 107 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 I3L4J1 428 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 ADAM12O43184 909 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 XPOTO43592 962 aaKnown RBP13.93□□□□□ -0.18
COL21A1-209ENST00000482933 PDGFBP01127 241 aaPredicted RBP13.93□□□□□ -0.18
COL21A1-209ENST00000482933 CXCL8P10145 99 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 LAMP2P13473 410 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 FSHRP23945 695 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 IGFBP6P24592 240 aaPredicted RBP13.93□□□□□ -0.18
COL21A1-209ENST00000482933 MCM4P33991 863 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 VCPP55072 806 aaKnown RBP13.93□□□□□ -0.18
COL21A1-209ENST00000482933 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 SEZ6Q53EL9 994 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 GRASPQ7Z6J2 395 aaPredicted RBP13.93□□□□□ -0.18
COL21A1-209ENST00000482933 APPL2Q8NEU8 664 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 SLC7A14Q8TBB6 771 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 C18orf25Q96B23 403 aaPredicted RBP13.93□□□□□ -0.18
COL21A1-209ENST00000482933 EPSTI1Q96J88 318 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 MYADMQ96S97 322 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 IRF2BPLQ9H1B7 796 aa13.93□□□□□ -0.18
COL21A1-209ENST00000482933 RPF1Q9H9Y2 349 aaKnown RBP13.93□□□□□ -0.18
COL21A1-209ENST00000482933 STK17AQ9UEE5 414 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms