RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 SLC11A1P49279 550 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 FMO5P49326 533 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 TAP1Q03518 808 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 UBE3AQ05086 875 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 SMYD5Q6GMV2 418 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 LUZP1Q86V48 1076 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 GPR65Q8IYL9 337 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 SLC39A11Q8N1S5 342 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 IGSF21Q96ID5 467 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 ZNF560Q96MR9 790 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 NDST4Q9H3R1 872 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 TUBGCP4Q9UGJ1 667 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 PUF60Q9UHX1 559 aaKnown RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 LZTS1Q9Y250 596 aa16.54■□□□□ 0.24
CCM2-215ENST00000482714 YBX2Q9Y2T7 364 aaKnown RBP16.54■□□□□ 0.24
CCM2-215ENST00000482714 RALGAPA2Q2PPJ7 1873 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 TDRD15B5MCY1 1934 aaKnown RBP16.53■□□□□ 0.24
CCM2-215ENST00000482714 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 CASTOR2A6NHX0 329 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 ITGB3P05106 788 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 TRIM49P0CI25 452 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 TRIM49CP0CI26 452 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 MYOGP15173 224 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 DNAJB2P25686 324 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 PBX2P40425 430 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 TAF6P49848 677 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 MXI1P50539 228 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 LILRA4P59901 499 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 BIRC3Q13489 604 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 NCOA4Q13772 614 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
CCM2-215ENST00000482714 GPR153Q6NV75 609 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 DPH6Q7L8W6 267 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 CCDC150Q8NCX0 1101 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 FBXL13Q8NEE6 735 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 TMEM169Q96HH4 297 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 RAB20Q9NX57 234 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 ADAM28Q9UKQ2 775 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 AGAP1Q9UPQ3 857 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 NUB1Q9Y5A7 615 aa16.53■□□□□ 0.24
CCM2-215ENST00000482714 LAMA2P24043 3122 aaKnown RBP16.53■□□□□ 0.24
CCM2-215ENST00000482714 ANK1P16157 1881 aa16.52■□□□□ 0.24
CCM2-215ENST00000482714 KRT19P08727 400 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 AARSP49588 968 aaKnown RBP eCLIP16.52■□□□□ 0.23
CCM2-215ENST00000482714 BMS1Q14692 1282 aaKnown RBP16.52■□□□□ 0.23
CCM2-215ENST00000482714 KRT31Q15323 416 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 SV2CQ496J9 727 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 FILIP1LQ4L180 1135 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 EPC2Q52LR7 807 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 PPP2R2DQ66LE6 453 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 LMBRD2Q68DH5 695 aaPredicted RBP16.52■□□□□ 0.23
CCM2-215ENST00000482714 C11orf84Q9BUA3 381 aaPredicted RBP16.52■□□□□ 0.23
CCM2-215ENST00000482714 FAM124BQ9H5Z6 455 aaPredicted RBP16.52■□□□□ 0.23
CCM2-215ENST00000482714 GOLGA2P5Q9HBQ8 144 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 GDAP2Q9NXN4 497 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 SIX4Q9UIU6 781 aa16.52■□□□□ 0.23
CCM2-215ENST00000482714 KPNA7A9QM74 516 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 B4GALT3O60512 393 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 EFEMP2O95967 443 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 POLR2BP30876 1174 aaKnown RBP16.51■□□□□ 0.23
CCM2-215ENST00000482714 UVSSAQ2YD98 709 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 DDX53Q86TM3 631 aaKnown RBP16.51■□□□□ 0.23
CCM2-215ENST00000482714 EHBP1Q8NDI1 1231 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 HPDLQ96IR7 371 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 FAM81BQ96LP2 452 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 PAAF1Q9BRP4 392 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 IMPG2Q9BZV3 1241 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 NKX2-4Q9H2Z4 354 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
CCM2-215ENST00000482714 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
CCM2-215ENST00000482714 SF3B1O75533 1304 aaKnown RBP eCLIP16.5■□□□□ 0.234e-7■■■■■ 133.7
CCM2-215ENST00000482714 H3BNC9 293 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 M0QZQ0 153 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 SYN3O14994 580 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 FGF18O76093 207 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 ASS1P00966 412 aaKnown RBP16.5■□□□□ 0.23
CCM2-215ENST00000482714 P4HA1P13674 534 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 CTNNB1P35222 781 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 COPB1P53618 953 aaKnown RBP16.5■□□□□ 0.23
CCM2-215ENST00000482714 CBWD6Q4V339 395 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 HSP90AA4PQ58FG1 418 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 WDR44Q5JSH3 913 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 CBWD3Q5JTY5 395 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 MIIPQ5JXC2 388 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 CBWD5Q5RIA9 395 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 FKBP15Q5T1M5 1219 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 PDE12Q6L8Q7 609 aaKnown RBP16.5■□□□□ 0.23
CCM2-215ENST00000482714 CD300LGQ6UXG3 332 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 GBP6Q6ZN66 633 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 KLHL23Q8NBE8 558 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 SUSD3Q96L08 255 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 DSEQ9UL01 958 aa16.5■□□□□ 0.23
CCM2-215ENST00000482714 PRG3Q9Y2Y8 225 aaPredicted RBP16.5■□□□□ 0.23
CCM2-215ENST00000482714 VNN1O95497 513 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 HLA-DRAP01903 254 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 MYL7Q01449 175 aa16.49■□□□□ 0.23
CCM2-215ENST00000482714 FUT10Q6P4F1 479 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms