RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 MRPL44Q9H9J2 332 aaKnown RBP11.39□□□□□ -0.59
CPSF4-212ENST00000482251 FAM86C1Q9NVL1 165 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 TFIP11Q9UBB9 837 aaKnown RBP11.39□□□□□ -0.59
CPSF4-212ENST00000482251 EPS15L1Q9UBC2 864 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 FBXL5Q9UKA1 691 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 CA14Q9ULX7 337 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 UBQLN1Q9UMX0 589 aaKnown RBP11.39□□□□□ -0.59
CPSF4-212ENST00000482251 NUMBLQ9Y6R0 609 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 TSC2P49815 1807 aa11.39□□□□□ -0.59
CPSF4-212ENST00000482251 GCNT3O95395 438 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 PAPLNO95428 1278 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 C1RP00736 705 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 LRG1P02750 347 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 OR4Q2P0C623 313 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 LAMP2P13473 410 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 HOXA9P31269 272 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 ELF1P32519 619 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 NASPP49321 788 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 CDR1P51861 262 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 CASP5P51878 434 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 HTR4Q13639 388 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 PABPC1LQ4VXU2 614 aaKnown RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 CWF19L1Q69YN2 538 aaKnown RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 ADALQ6DHV7 355 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 SLC8B1Q6J4K2 584 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 ALYREFQ86V81 257 aaKnown RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 POMGNT1Q8WZA1 660 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 FGF13Q92913 245 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 DNAJC19Q96DA6 116 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 CYP4F11Q9HBI6 524 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 IGSF9Q9P2J2 1179 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 DNMT3BQ9UBC3 853 aaKnown RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 CPSF3Q9UKF6 684 aaKnown RBP11.38□□□□□ -0.59
CPSF4-212ENST00000482251 PCDHB8Q9UN66 801 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 GTF3C3Q9Y5Q9 886 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 COL4A3Q01955 1670 aa11.38□□□□□ -0.59
CPSF4-212ENST00000482251 H7C4K7 107 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 SPTLC2O15270 562 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 PPP1R37O75864 691 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 SEC24AO95486 1093 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 LRPAP1P30533 357 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 YWHAHQ04917 246 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-212ENST00000482251 ADCY1Q08828 1119 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 TCF15Q12870 199 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 PKP1Q13835 747 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 TMEM132DQ14C87 1099 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 KYAT1Q16773 422 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 SLC5A9Q2M3M2 681 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 PARM1Q6UWI2 310 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 DSTYKQ6XUX3 929 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 ZNF720Q7Z2F6 126 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 SLC44A3Q8N4M1 653 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 LINC00301Q8NCQ3 95 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 ZSWIM2Q8NEG5 633 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 APPL2Q8NEU8 664 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 BEST2Q8NFU1 509 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 GPR152Q8TDT2 470 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 FGF14Q92915 247 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 KCNN1Q92952 543 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 SNX21Q969T3 373 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 SAAL1Q96ER3 474 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 FAM84AQ96KN4 292 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 KXD1Q9BQD3 176 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 RPP25Q9BUL9 199 aaKnown RBP11.37□□□□□ -0.59
CPSF4-212ENST00000482251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.37□□□□□ -0.59
CPSF4-212ENST00000482251 AGO2Q9UKV8 859 aaKnown RBP11.37□□□□□ -0.59
CPSF4-212ENST00000482251 CDH7Q9ULB5 785 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 INSL5Q9Y5Q6 135 aa11.37□□□□□ -0.59
CPSF4-212ENST00000482251 NOTCH4Q99466 2003 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-212ENST00000482251 H0Y858 1186 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 SPTLC1O15269 473 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 XPOTO43592 962 aaKnown RBP11.36□□□□□ -0.59
CPSF4-212ENST00000482251 TBC1D4O60343 1298 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 ABLIM3O94929 683 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 RHOP08100 348 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 SRFP11831 508 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 CEBPBP17676 345 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 GAP43P17677 238 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 SCP2P22307 547 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 RFX1P22670 979 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 PTPN5P54829 565 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 WNT7BP56706 349 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 MRPL58Q14197 206 aaKnown RBP11.36□□□□□ -0.59
CPSF4-212ENST00000482251 ZBTB6Q15916 424 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
CPSF4-212ENST00000482251 SPATA1Q5VX52 437 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 ASTLQ6HA08 431 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-212ENST00000482251 RNF19BQ6ZMZ0 732 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 USP37Q86T82 979 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 NPAS3Q8IXF0 933 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 EFCAB13Q8IY85 973 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 GLIS3Q8NEA6 775 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 ZNF461Q8TAF7 563 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms