RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NGEFQ8N5V2 710 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 LINC01356Q8N9X3 169 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 MARCH10Q8NA82 808 aaPredicted RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 FAM156AQ8NDB6 213 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 SLC35G2Q8TBE7 412 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 KIAA1191Q96A73 305 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 EAF2Q96CJ1 260 aaPredicted RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 UROC1Q96N76 676 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 TAAR9Q96RI9 348 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 RMDN3Q96TC7 470 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 MTG2Q9H4K7 406 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 BRD9Q9H8M2 597 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PARD6AQ9NPB6 346 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 HELLSQ9NRZ9 838 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 CCM2LQ9NUG4 571 aaPredicted RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 PIH1D1Q9NWS0 290 aaKnown RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 HOXC10Q9NYD6 342 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 GPRC5BQ9NZH0 403 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 FTSJ1Q9UET6 329 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 TMPRSS11EQ9UL52 423 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 POLHQ9Y253 713 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGA9Q9Y5G4 932 aaKnown RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGA8Q9Y5G5 932 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGA7Q9Y5G6 932 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGA6Q9Y5G7 932 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGA3Q9Y5H0 932 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGA2Q9Y5H1 932 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 A0A0G2JNJ9 132 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 ANKRD18BA2A2Z9 1011 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 SH3D21A4FU49 640 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 KLHL33A6NCF5 533 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 EIF3FO00303 357 aaPredicted RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 AP1G1O43747 822 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 CUTAO60888 179 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 OPHN1O60890 802 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 H2AFYO75367 372 aaKnown RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 POLBP06746 335 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 INHBBP09529 407 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 CLEC2LP0C7M8 214 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 ZNF28P17035 718 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 ABCB4P21439 1286 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 SMARCA1P28370 1054 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 STAT1P42224 750 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 RECQLP46063 649 aaPredicted RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 TUBP50607 506 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 MLLT6P55198 1093 aaPredicted RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 INHBEP58166 350 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 CD83Q01151 205 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 DLX2Q07687 328 aaPredicted RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 VWA3BQ502W6 1294 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 CT83Q5H943 113 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 PITRM1Q5JRX3 1037 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 KLHL10Q6JEL2 608 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 TRMT10BQ6PF06 316 aaKnown RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 UNQ6494/PRO21346Q6UXR6 183 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 PDZD4Q76G19 769 aaPredicted RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 KCNK18Q7Z418 384 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 HEATR4Q86WZ0 1026 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 TMTC1Q8IUR5 882 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 IQCF2Q8IXL9 164 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 CEP57L1Q8IYX8 460 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 CDYL2Q8N8U2 506 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 MIGA1Q8NAN2 632 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 OR14C36Q8NHC7 312 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 DEPTORQ8TB45 409 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 SSH3Q8TE77 659 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 TGFBRAP1Q8WUH2 860 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 AUTS2Q8WXX7 1259 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 CENPIQ92674 756 aaPredicted RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 HSPBAP1Q96EW2 488 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 RBM18Q96H35 190 aaKnown RBP4.66□□□□□ -1.66
VPS41-212ENST00000482217 HIST1H2AHQ96KK5 128 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 TSGA13Q96PP4 275 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 KCNC2Q96PR1 638 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 HIST1H2AJQ99878 128 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 HAPLN2Q9GZV7 340 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 ZCCHC4Q9H5U6 513 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 C1orf112Q9NSG2 853 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 TMEM51Q9NW97 253 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 DNAJC28Q9NX36 388 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 NTMQ9P121 344 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 Q9UFV3 132 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 PRSS50Q9UI38 385 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 PRDM4Q9UKN5 801 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 GPR34Q9UPC5 381 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 PCDHB6Q9Y5E3 794 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 ABCC9O60706 1549 aa4.66□□□□□ -1.66
VPS41-212ENST00000482217 C17orf113A0A1B0GUU1 675 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 FSD2A1L4K1 749 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 RASA4BC9J798 803 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 MPHOSPH10O00566 681 aaKnown RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 NRP2O60462 931 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 CTNND1O60716 968 aaKnown RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 TRIM13O60858 407 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 COQ9O75208 318 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 PCDH8O95206 1070 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 SLC3A2P08195 630 aaKnown RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 BMP7P18075 431 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 CNTFP26441 200 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms