RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 OXCT2Q9BYC2 517 aaPredicted RBP10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 SLC2A4RGQ9NR83 387 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 DNMT3BQ9UBC3 853 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 SEL1LQ9UBV2 794 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 UBQLN1Q9UMX0 589 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 PCDHB8Q9UN66 801 aa10.59□□□□□ -0.71
TMEM39A-207ENST00000482162 A0A087X0B3 334 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 ANO9A1A5B4 782 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 ANKRD63C9JTQ0 380 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 PIRO00625 290 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 GALR2O43603 387 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 STX6O43752 255 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 NARSO43776 548 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 XYLBO75191 536 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 MICAL2O94851 1124 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 SEC24AO95486 1093 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 SRFP11831 508 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 HARSP12081 509 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 PAX3P23760 479 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 NMT1P30419 496 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 ADSSP30520 456 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 LIG4P49917 911 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 MRE11P49959 708 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 ZC2HC1CQ53FD0 456 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 SLFN12LQ6IEE8 588 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 TMEM130Q8N3G9 435 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 LINC00301Q8NCQ3 95 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 APPL2Q8NEU8 664 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 DDX12PQ92771 950 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 RPP25Q9BUL9 199 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 ASB7Q9H672 318 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 CCDC39Q9UFE4 941 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 DERAQ9Y315 318 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 NUB1Q9Y5A7 615 aa10.58□□□□□ -0.72
TMEM39A-207ENST00000482162 PDCD11Q14690 1871 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 KRBA1A5PL33 1030 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 K7ENM7 598 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 CCL16O15467 120 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 TBCAO75347 108 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 VNN2O95498 520 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 GAP43P17677 238 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 AOC1P19801 751 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 TYMPP19971 482 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 EPHA5P54756 1037 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 SPAG1Q07617 926 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 RRAGBQ5VZM2 374 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 PHLDB3Q6NSJ2 640 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 PARM1Q6UWI2 310 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 CCDC73Q6ZRK6 1079 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 SV2BQ7L1I2 683 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 SFR1Q86XK3 245 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 NPAS3Q8IXF0 933 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 ITFG1Q8TB96 612 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 BICD1Q96G01 975 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 MSTO1Q9BUK6 570 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 RPF1Q9H9Y2 349 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 OLFML3Q9NRN5 406 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 HCFC1R1Q9NWW0 138 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 GDE1Q9NZC3 331 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 AFF4Q9UHB7 1163 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 C2CD2Q9Y426 696 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 NUMBLQ9Y6R0 609 aa10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 RIF1Q5UIP0 2472 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-207ENST00000482162 TISP43B9A030 160 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PROB1E7EW31 1015 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 SPTLC1O15269 473 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PI15O43692 258 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PPP6R2O75170 966 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 CYP11A1P05108 521 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 KRT18P05783 430 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 RHOP08100 348 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PTPN2P17706 415 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 LILRA4P59901 499 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 KCNA1Q09470 495 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 POSTNQ15063 836 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 E2F4Q16254 413 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 SLC5A9Q2M3M2 681 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 CTXN3Q4LDR2 81 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PABPC1LQ4VXU2 614 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 C9orf57Q5W0N0 161 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 ZNF280DQ6N043 979 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 CNNM4Q6P4Q7 775 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 DYMQ7RTS9 669 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 FGF14Q92915 247 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 PHOX2BQ99453 314 aa10.56□□□□□ -0.72
TMEM39A-207ENST00000482162 IKZF4Q9H2S9 585 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms