RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CGRRF1Q99675 332 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 RASSF4Q9H2L5 321 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 KIAA1586Q9HCI6 787 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 VTA1Q9NP79 307 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 SETD4Q9NVD3 440 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 FAM153AQ9UHL3 310 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 STXBP5LQ9Y2K9 1186 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 NCANO14594 1321 aa15.46■□□□□ 0.07
CHD3-211ENST00000481999 PGRMC1O00264 195 aaKnown RBP15.46■□□□□ 0.06
CHD3-211ENST00000481999 ACO1P21399 889 aaKnown RBP15.46■□□□□ 0.06
CHD3-211ENST00000481999 EFNA5P52803 228 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 PTENP60484 403 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 CDR2Q01850 454 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 GCNT1Q02742 428 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 MESDQ14696 234 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 WDR44Q5JSH3 913 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 MARCH8Q5T0T0 291 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 FMNL3Q8IVF7 1028 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 BRSK2Q8IWQ3 736 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 SLC45A1Q9Y2W3 748 aa15.46■□□□□ 0.06
CHD3-211ENST00000481999 KAT6AQ92794 2004 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 DYNC1LI2O43237 492 aaPredicted RBP15.45■□□□□ 0.06
CHD3-211ENST00000481999 MMP3P08254 477 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 SKOR1P84550 965 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 SLC20A2Q08357 652 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 DNAJC21Q5F1R6 531 aaKnown RBP15.45■□□□□ 0.06
CHD3-211ENST00000481999 CD302Q8IX05 232 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 OR6J1Q8NGC5 347 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 CDT1Q9H211 546 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 FZD8Q9H461 694 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 PTPRHQ9HD43 1115 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 CPSF3Q9UKF6 684 aaKnown RBP15.45■□□□□ 0.06
CHD3-211ENST00000481999 ACKR2O00590 384 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 OGTO15294 1046 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 EIF3HO15372 352 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHD3-211ENST00000481999 GJB6O95452 261 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 HOXC6P09630 235 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 WEE2P0C1S8 567 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 CYP2B6P20813 491 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 GUCY2FP51841 1108 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 FKBP1BP68106 108 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 MCL1Q07820 350 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 ORC1Q13415 861 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 CUL1Q13616 776 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 CUL2Q13617 745 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 HIC1Q14526 733 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 KIZQ2M2Z5 673 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 ZNF653Q96CK0 615 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 CYFIP2Q96F07 1278 aa15.45■□□□□ 0.06
CHD3-211ENST00000481999 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.45■□□□□ 0.06
CHD3-211ENST00000481999 FAM49AQ9H0Q0 323 aaPredicted RBP15.45■□□□□ 0.06
CHD3-211ENST00000481999 RTN2O75298 545 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 LDHAP00338 332 aaKnown RBP15.44■□□□□ 0.06
CHD3-211ENST00000481999 SLC26A2P50443 739 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 TAF1CQ15572 869 aaPredicted RBP15.44■□□□□ 0.06
CHD3-211ENST00000481999 DUSP28Q4G0W2 176 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 OLFML2BQ68BL8 750 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 RASAL3Q86YV0 1011 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 C10orf67Q8IYJ2 551 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 HES6Q96HZ4 224 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 SCLT1Q96NL6 688 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 DDX47Q9H0S4 455 aaKnown RBP15.44■□□□□ 0.06
CHD3-211ENST00000481999 NOC2LQ9Y3T9 749 aaKnown RBP15.44■□□□□ 0.06
CHD3-211ENST00000481999 DAAM1Q9Y4D1 1078 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 PCDHB4Q9Y5E5 795 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 ALG6Q9Y672 507 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 CCDC188H7C350 402 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 NFICP08651 508 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 PROZP22891 400 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 GNGT1P63211 74 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 MTHFD1LQ6UB35 978 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 MPZL3Q6UWV2 235 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 TSHZ1Q6ZSZ6 1077 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 C1orf131Q8NDD1 294 aaKnown RBP15.44■□□□□ 0.06
CHD3-211ENST00000481999 GTF3C2Q8WUA4 911 aaPredicted RBP15.44■□□□□ 0.06
CHD3-211ENST00000481999 NLRP7Q8WX94 980 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 NUP85Q9BW27 656 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 CDHR5Q9HBB8 845 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 KCNG1Q9UIX4 513 aa15.44■□□□□ 0.06
CHD3-211ENST00000481999 TRIM66O15016 1216 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 DDX3YO15523 660 aaKnown RBP15.43■□□□□ 0.06
CHD3-211ENST00000481999 KRT14P02533 472 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 CLTAP09496 248 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 ARF4P18085 180 aaPredicted RBP15.43■□□□□ 0.06
CHD3-211ENST00000481999 HSPA9P38646 679 aaKnown RBP15.43■□□□□ 0.06
CHD3-211ENST00000481999 RAP1GAPP47736 663 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 GPC5P78333 572 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 BEX3Q00994 111 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 GRIK4Q16099 956 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 AMHR2Q16671 573 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 ABRAQ8N0Z2 381 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 RASGEF1CQ8N431 466 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 KCNN1Q92952 543 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 AMFRQ9UKV5 643 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 TRIP12Q14669 1992 aaPredicted RBP15.43■□□□□ 0.06
CHD3-211ENST00000481999 GRIN2DO15399 1336 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 RBM47A0AV96 593 aaKnown RBP15.43■□□□□ 0.06
CHD3-211ENST00000481999 KRT19P08727 400 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 CTGFP29279 349 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 ZNF200P98182 395 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms