RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MRPS17Q9Y2R5 130 aaKnown RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 MRPS23Q9Y3D9 190 aaKnown RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
COL17A1-205ENST00000480127 PCDHB6Q9Y5E3 794 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 ARID2Q68CP9 1835 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 SPTBN2O15020 2390 aa7.75□□□□□ -1.17
COL17A1-205ENST00000480127 ZFHX4Q86UP3 3567 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 PP2D1A8MPX8 630 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 E9PMD0 336 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 FAM13AO94988 1023 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 RETP07949 1114 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 CEBPBP17676 345 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 GJB2P29033 226 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 CDC25AP30304 524 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 MCM4P33991 863 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 TXLNAP40222 546 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 NPTX2P47972 431 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 LIG4P49917 911 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 GRM2Q14416 872 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 FAM187BQ17R55 369 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 PRSS36Q5K4E3 855 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 LARP1BQ659C4 914 aaKnown RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 ANKS3Q6ZW76 656 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 USP37Q86T82 979 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 MAP4K3Q8IVH8 894 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 CELF5Q8N6W0 485 aaKnown RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 NETO1Q8TDF5 533 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 NOC3LQ8WTT2 800 aaKnown RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 BSNDQ8WZ55 320 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 DDX27Q96GQ7 796 aaKnown RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 TIPINQ9BVW5 301 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 FZD8Q9H461 694 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 SLITRK6Q9H5Y7 841 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 LARSQ9P2J5 1176 aaKnown RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 DAXXQ9UER7 740 aaPredicted RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 NDRG2Q9UN36 371 aaKnown RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 R3HCC1Q9Y3T6 440 aaKnown RBP7.74□□□□□ -1.17
COL17A1-205ENST00000480127 BACE2Q9Y5Z0 518 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 CDY1Q9Y6F8 540 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 VWA8A3KMH1 1905 aa7.74□□□□□ -1.17
COL17A1-205ENST00000480127 COL4A2P08572 1712 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 ARHGEF37A1IGU5 675 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 H7C4K7 107 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 TMEM189-UBE2V1I3L0A0 370 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 I3L4J1 428 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 K7ENM7 598 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 PODXLO00592 558 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 MAN2B1O00754 1011 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 HNRNPDLO14979 420 aaKnown RBP7.73□□□□□ -1.17
COL17A1-205ENST00000480127 CLDN3O15551 220 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 XPOTO43592 962 aaKnown RBP7.73□□□□□ -1.17
COL17A1-205ENST00000480127 HRO43593 1189 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 GDF9O60383 454 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 LRP3O75074 770 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 CLSTN1O94985 981 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 BMP15O95972 392 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 EDN1P05305 212 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 HSP90AA1P07900 732 aaKnown RBP7.73□□□□□ -1.17
COL17A1-205ENST00000480127 CHRNB1P11230 501 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 CPB1P15086 417 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 PTPN2P17706 415 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 TKTP29401 623 aaKnown RBP7.73□□□□□ -1.17
COL17A1-205ENST00000480127 PRPHP41219 470 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 CCR2P41597 374 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 CLCNKBP51801 687 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 NRLP54845 237 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 PPP2R3AQ06190 1150 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 DMWDQ09019 674 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 GAS6Q14393 721 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 NOLC1Q14978 699 aaKnown RBP eCLIP7.73□□□□□ -1.17
COL17A1-205ENST00000480127 TAF12Q16514 161 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 CSRP2Q16527 193 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 FAM78AQ5JUQ0 283 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 EEF1DP3Q658K8 133 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 IQCEQ6IPM2 695 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 MPZL3Q6UWV2 235 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 PRR23CQ6ZRP0 262 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 GPBP1Q86WP2 473 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 MYCT1Q8N699 235 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 C3orf58Q8NDZ4 430 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 ZNF461Q8TAF7 563 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 FAM3CQ92520 227 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 TCEAL4Q96EI5 215 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 IER2Q9BTL4 223 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 RUSC1Q9BVN2 902 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 TARS2Q9BW92 718 aaKnown RBP7.73□□□□□ -1.17
COL17A1-205ENST00000480127 BRD9Q9H8M2 597 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 LMAN1LQ9HAT1 526 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 ZFP14Q9HCL3 533 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 ZNF334Q9HCZ1 680 aaPredicted RBP7.73□□□□□ -1.17
COL17A1-205ENST00000480127 TRPV5Q9NQA5 729 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 SEMA4GQ9NTN9 838 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 RAB23Q9ULC3 237 aa7.73□□□□□ -1.17
COL17A1-205ENST00000480127 MAP1BP46821 2468 aaKnown RBP7.72□□□□□ -1.17
COL17A1-205ENST00000480127 WDR27A2RRH5 827 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 MOSPD3O75425 235 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 MICAL2O94851 1124 aa7.72□□□□□ -1.17
COL17A1-205ENST00000480127 ABLIM3O94929 683 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms