RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 KCNE1P15382 129 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 ADSSP30520 456 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 LIG4P49917 911 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 CLCN5P51795 746 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 MARSP56192 900 aaKnown RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 CLDN10P78369 228 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 DNAH14Q0VDD8 3507 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 STIM1Q13586 685 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 MTMR3Q13615 1198 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 BMS1Q14692 1282 aaKnown RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 RARS2Q5T160 578 aaKnown RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 ALKAL1Q6UXT8 129 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 CYP26C1Q6V0L0 522 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 MAEAQ7L5Y9 396 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 HDAC7Q8WUI4 952 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 STAMQ92783 540 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 RPS6KC1Q96S38 1066 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 KIFC3Q9BVG8 833 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 EIF2AQ9BY44 585 aaKnown RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 IRF2BPLQ9H1B7 796 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 ASB7Q9H672 318 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 AGPAT3Q9NRZ7 376 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 TOPORSQ9NS56 1045 aaPredicted RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 CNTN3Q9P232 1028 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 MAN1B1Q9UKM7 699 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 FAN1Q9Y2M0 1017 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 C2CD2Q9Y426 696 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 IPPQ9Y573 584 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 CEP250Q9BV73 2442 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 ANK1P16157 1881 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 ARL5CA6NH57 179 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 SLC16A3O15427 465 aaKnown RBP9.68□□□□□ -0.86
DDX56-211ENST00000479602 TEX28O15482 410 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 ASGR2P07307 311 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 MYBP10242 640 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 CYP3A5P20815 502 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 BMP6P22004 513 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 CCNE1P24864 410 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 CASP1P29466 404 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 NBL1P41271 181 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 DSG1Q02413 1049 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 SURF1Q15526 300 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 ZNF568Q3ZCX4 644 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 TMC5Q6UXY8 1006 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 BRSK2Q8IWQ3 736 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 ZNF707Q96C28 371 aaPredicted RBP9.68□□□□□ -0.86
DDX56-211ENST00000479602 CEP63Q96MT8 703 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 BPIFA3Q9BQP9 254 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 HERC2P3Q9BVR0 1158 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 TARS2Q9BW92 718 aaKnown RBP9.68□□□□□ -0.86
DDX56-211ENST00000479602 FGFBP2Q9BYJ0 223 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 SFXN1Q9H9B4 322 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 KCNK12Q9HB15 430 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 TMEM63CQ9P1W3 806 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 CPSF3Q9UKF6 684 aaKnown RBP9.68□□□□□ -0.86
DDX56-211ENST00000479602 KMT2EQ8IZD2 1858 aa9.68□□□□□ -0.86
DDX56-211ENST00000479602 TTC26A0AVF1 554 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 TTLL13PA6NNM8 815 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 PPP1R3GB7ZBB8 358 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 F8W810 466 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 PMM2O15305 246 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 PI15O43692 258 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 EXTL3O43909 919 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 IL18RAPO95256 599 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 POMCP01189 267 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 SP100P23497 879 aaPredicted RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 RPL13P26373 211 aaKnown RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 PRCPP42785 496 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 NLRP12P59046 1061 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 RNASELQ05823 741 aaKnown RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 KCNA1Q09470 495 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 GRIK3Q13003 919 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 NFKBIBQ15653 356 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 NAB2Q15742 525 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 ZC2HC1CQ53FD0 456 aaPredicted RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 CWF19L1Q69YN2 538 aaKnown RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 ASTLQ6HA08 431 aaPredicted RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 OTOP3Q7RTS5 596 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 USP37Q86T82 979 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 SNX27Q96L92 541 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 ZFP42Q96MM3 310 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 GAD1Q99259 594 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 FUCA2Q9BTY2 467 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 CCDC94Q9BW85 323 aaPredicted RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 EMILIN2Q9BXX0 1053 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 GPR62Q9BZJ7 368 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 WDR6Q9NNW5 1121 aaKnown RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 SLC39A2Q9NP94 309 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 MRPL17Q9NRX2 175 aaKnown RBP9.67□□□□□ -0.86
DDX56-211ENST00000479602 EPS15L1Q9UBC2 864 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 RWDD2AQ9UIY3 292 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 INPP5FQ9Y2H2 1132 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 HES2Q9Y543 173 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 FRYLO94915 3013 aa9.67□□□□□ -0.86
DDX56-211ENST00000479602 H0Y858 1186 aa9.66□□□□□ -0.86
DDX56-211ENST00000479602 IKBKBO14920 756 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms