RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 LRMPQ12912 555 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 E4F1Q66K89 784 aaPredicted RBP14.12□□□□□ -0.15
CHD3-210ENST00000479080 IQCEQ6IPM2 695 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 FAM117BQ6P1L5 589 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 GLB1LQ6UWU2 654 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 COLGALT2Q8IYK4 626 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 UBR7Q8N806 425 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 BEST2Q8NFU1 509 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 TSPAN18Q96SJ8 248 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 ARID3AQ99856 593 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 SDCBP2Q9H190 292 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 CWH43Q9H720 699 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 NRDE2Q9H7Z3 1164 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 FAM207AQ9NSI2 230 aaPredicted RBP14.12□□□□□ -0.15
CHD3-210ENST00000479080 ITGA11Q9UKX5 1188 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 LRFN2Q9ULH4 789 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 AGAP1Q9UPQ3 857 aa14.12□□□□□ -0.15
CHD3-210ENST00000479080 FNDC1Q4ZHG4 1894 aaPredicted RBP14.12□□□□□ -0.15
CHD3-210ENST00000479080 TBKBP1A7MCY6 615 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 EFCAB14O75071 495 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 STAU1O95793 577 aaKnown RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 AMHP03971 560 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 ITGB1P05556 798 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 ASPAP45381 313 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 RGS19P49795 217 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 NOP14P78316 857 aaKnown RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 HTRA4P83105 476 aaPredicted RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 TUSC3Q13454 348 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 ARID5BQ14865 1188 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 PAN2Q504Q3 1202 aaKnown RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 FIGNQ5HY92 759 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 SPECC1LQ69YQ0 1117 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 FAM109BQ6ICB4 259 aaPredicted RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 SPC24Q8NBT2 197 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 CACTINQ8WUQ7 758 aaKnown RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 BCL7CQ8WUZ0 217 aaPredicted RBP14.11□□□□□ -0.15
CHD3-210ENST00000479080 GDF15Q99988 308 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 VRTNQ9H8Y1 702 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 MARCH5Q9NX47 278 aa14.11□□□□□ -0.15
CHD3-210ENST00000479080 ZBBXA8MT70 800 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 PODXLO00592 558 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 ARHGEF15O94989 841 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 KRT19P08727 400 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 PNMA6AP0CW24 399 aaPredicted RBP14.1□□□□□ -0.15
CHD3-210ENST00000479080 UCHL3P15374 230 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 PBX3P40426 434 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 SLC11A1P49279 550 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 AARSP49588 968 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHD3-210ENST00000479080 RBP5P82980 135 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 SHHQ15465 462 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 UPP1Q16831 310 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 RRAGAQ7L523 313 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 LIMS2Q7Z4I7 341 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 TMEM173Q86WV6 379 aaPredicted RBP14.1□□□□□ -0.15
CHD3-210ENST00000479080 GPIHBP1Q8IV16 184 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 LRRC52Q8N7C0 313 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 PPP1R9BQ96SB3 815 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 APEX2Q9UBZ4 518 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 NME7Q9Y5B8 376 aa14.1□□□□□ -0.15
CHD3-210ENST00000479080 TNRC18O15417 2968 aaPredicted RBP14.09□□□□□ -0.15
CHD3-210ENST00000479080 SCN1AP35498 2009 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 H0YGN5 161 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 HOXA2O43364 376 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 ZC3H11AO75152 810 aaKnown RBP eCLIP14.09□□□□□ -0.15
CHD3-210ENST00000479080 PHACTR2O75167 634 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 KIF4AO95239 1232 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 GJB5O95377 273 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 ACO1P21399 889 aaKnown RBP14.09□□□□□ -0.15
CHD3-210ENST00000479080 CASP14P31944 242 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 JAM2P57087 298 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 POLR2FP61218 127 aaKnown RBP14.09□□□□□ -0.15
CHD3-210ENST00000479080 ZNF699Q32M78 642 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 TC2NQ8N9U0 490 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 OLIG1Q8TAK6 271 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 URGCPQ8TCY9 931 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 NT5C1BQ96P26 610 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 LBHD1Q9BQE6 289 aaPredicted RBP14.09□□□□□ -0.15
CHD3-210ENST00000479080 BCO2Q9BYV7 579 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 SMYD3Q9H7B4 428 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 NLRC4Q9NPP4 1024 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 FBXL5Q9UKA1 691 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 DNAJC12Q9UKB3 198 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 NR2E3Q9Y5X4 410 aa14.09□□□□□ -0.15
CHD3-210ENST00000479080 MRPL42Q9Y6G3 142 aaKnown RBP14.09□□□□□ -0.15
CHD3-210ENST00000479080 TDRD15B5MCY1 1934 aaKnown RBP14.08□□□□□ -0.16
CHD3-210ENST00000479080 A0A1W2PQJ5 194 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 LCHNA4D1U4 455 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 XPOTO43592 962 aaKnown RBP14.08□□□□□ -0.16
CHD3-210ENST00000479080 MFAP3LO75121 409 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 EFEMP2O95967 443 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 TPM3P06753 285 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 ATICP31939 592 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 BRCC3P46736 316 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 RAP1GAPP47736 663 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 KCNJ6P48051 423 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 TRPC3Q13507 836 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 SGSM1Q2NKQ1 1148 aa14.08□□□□□ -0.16
CHD3-210ENST00000479080 PDXDC1Q6P996 788 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms